- Pre-registration nursing students
- No definition of master’s degree in nursing described in the publication
After the search, we collated and uploaded all the identified records into EndNote v.X8 (Clarivate Analytics, Philadelphia, Pennsylvania) and removed any duplicates. Two independent reviewers (MCS and SA) screened the titles and abstracts for assessment in line with the inclusion criteria. They retrieved and assessed the full texts of the selected studies while applying the inclusion criteria. Any disagreements about the eligibility of studies were resolved by discussion or, if no consensus could be reached, by involving experienced researchers (MZ-S and RP).
The first reviewer (MCS) extracted data from the selected publications. For this purpose, an extraction tool developed by the authors was used. This tool comprised the following criteria: author(s), year of publication, country, research question, design, case definition, data sources, and methodologic and data-analysis triangulation. First, we extracted and summarized information about the case study design. Second, we narratively summarized the way in which the data and methodological triangulation were described. Finally, we summarized the information on within-case or cross-case analysis. This process was performed using Microsoft Excel. One reviewer (MCS) extracted data, whereas another reviewer (SA) cross-checked the data extraction, making suggestions for additions or edits. Any disagreements between the reviewers were resolved through discussion.
A total of 149 records were identified in 2 databases. We removed 20 duplicates and screened 129 reports by title and abstract. A total of 46 reports were assessed for eligibility. Through hand searches, we identified 117 additional records. Of these, we excluded 98 reports after title and abstract screening. A total of 17 reports were assessed for eligibility. From the 2 databases and the hand search, 63 reports were assessed for eligibility. Ultimately, we included 8 articles for data extraction. No further articles were included after the reference list screening of the included studies. A PRISMA flow diagram of the study selection and inclusion process is presented in Figure 1 . As shown in Tables 2 and and3, 3 , the articles included in this scoping review were published between 2010 and 2022 in Canada (n = 3), the United States (n = 2), Australia (n = 2), and Scotland (n = 1).
PRISMA flow diagram.
Characteristics of Articles Included.
Author | Contandriopoulos et al | Flinter | Hogan et al | Hungerford et al | O’Rourke | Roots and MacDonald | Schadewaldt et al | Strachan et al |
---|---|---|---|---|---|---|---|---|
Country | Canada | The United States | The United States | Australia | Canada | Canada | Australia | Scotland |
How or why research question | No information on the research question | Several how or why research questions | What and how research question | No information on the research question | Several how or why research questions | No information on the research question | What research question | What and why research questions |
Design and referenced author of methodological guidance | Six qualitative case studies Robert K. Yin | Multiple-case studies design Robert K. Yin | Multiple-case studies design Robert E. Stake | Case study design Robert K. Yin | Qualitative single-case study Robert K. Yin Robert E. Stake Sharan Merriam | Single-case study design Robert K. Yin Sharan Merriam | Multiple-case studies design Robert K. Yin Robert E. Stake | Multiple-case studies design |
Case definition | Team of health professionals (Small group) | Nurse practitioners (Individuals) | Primary care practices (Organization) | Community-based NP model of practice (Organization) | NP-led practice (Organization) | Primary care practices (Organization) | No information on case definition | Health board (Organization) |
Overview of Within-Method, Between/Across-Method, and Data-Analysis Triangulation.
Author | Contandriopoulos et al | Flinter | Hogan et al | Hungerford et al | O’Rourke | Roots and MacDonald | Schadewaldt et al | Strachan et al |
---|---|---|---|---|---|---|---|---|
Within-method triangulation (using within-method triangulation use at least 2 data-collection procedures from the same design approach) | ||||||||
: | ||||||||
Interviews | X | x | x | x | x | |||
Observations | x | x | ||||||
Public documents | x | x | x | |||||
Electronic health records | x | |||||||
Between/across-method (using both qualitative and quantitative data-collection procedures in the same study) | ||||||||
: | ||||||||
: | ||||||||
Interviews | x | x | x | |||||
Observations | x | x | ||||||
Public documents | x | x | ||||||
Electronic health records | x | |||||||
: | ||||||||
Self-assessment | x | |||||||
Service records | x | |||||||
Questionnaires | x | |||||||
Data-analysis triangulation (combination of 2 or more methods of analyzing data) | ||||||||
: | ||||||||
: | ||||||||
Deductive | x | x | x | |||||
Inductive | x | x | ||||||
Thematic | x | x | ||||||
Content | ||||||||
: | ||||||||
Descriptive analysis | x | x | x | |||||
: | ||||||||
: | ||||||||
Deductive | x | x | x | x | ||||
Inductive | x | x | ||||||
Thematic | x | |||||||
Content | x |
The following sections describe the research question, case definition, and case study design. Case studies are most appropriate when asking “how” or “why” questions. 1 According to Yin, 1 how and why questions are explanatory and lead to the use of case studies, histories, and experiments as the preferred research methods. In 1 study from Canada, eg, the following research question was presented: “How and why did stakeholders participate in the system change process that led to the introduction of the first nurse practitioner-led Clinic in Ontario?” (p7) 19 Once the research question has been formulated, the case should be defined and, subsequently, the case study design chosen. 1 In typical case studies with mixed methods, the 2 types of data are gathered concurrently in a convergent design and the results merged to examine a case and/or compare multiple cases. 10
“How” or “why” questions were found in 4 studies. 16 , 17 , 19 , 22 Two studies additionally asked “what” questions. Three studies described an exploratory approach, and 1 study presented an explanatory approach. Of these 4 studies, 3 studies chose a qualitative approach 17 , 19 , 22 and 1 opted for mixed methods with a convergent design. 16
In the remaining studies, either the research questions were not clearly stated or no “how” or “why” questions were formulated. For example, “what” questions were found in 1 study. 21 No information was provided on exploratory, descriptive, and explanatory approaches. Schadewaldt et al 21 chose mixed methods with a convergent design.
A total of 5 studies defined the case as an organizational unit. 17 , 18 - 20 , 22 Of the 8 articles, 4 reported multiple-case studies. 16 , 17 , 22 , 23 Another 2 publications involved single-case studies. 19 , 20 Moreover, 2 publications did not state the case study design explicitly.
This section describes within-method triangulation, which involves employing at least 2 data-collection procedures within the same design approach. 6 , 7 This can also be called data source triangulation. 8 Next, we present the single data-collection procedures in detail. In 5 studies, information on within-method triangulation was found. 15 , 17 - 19 , 22 Studies describing a quantitative approach and the triangulation of 2 or more quantitative data-collection procedures could not be included in this scoping review.
Five studies used qualitative data-collection procedures. Two studies combined face-to-face interviews and documents. 15 , 19 One study mixed in-depth interviews with observations, 18 and 1 study combined face-to-face interviews and documentation. 22 One study contained face-to-face interviews, observations, and documentation. 17 The combination of different qualitative data-collection procedures was used to present the case context in an authentic and complex way, to elicit the perspectives of the participants, and to obtain a holistic description and explanation of the cases under study.
All 5 studies used qualitative interviews as the primary data-collection procedure. 15 , 17 - 19 , 22 Face-to-face, in-depth, and semi-structured interviews were conducted. The topics covered in the interviews included processes in the introduction of new care services and experiences of barriers and facilitators to collaborative work in general practices. Two studies did not specify the type of interviews conducted and did not report sample questions. 15 , 18
In 2 studies, qualitative observations were carried out. 17 , 18 During the observations, the physical design of the clinical patients’ rooms and office spaces was examined. 17 Hungerford et al 18 did not explain what information was collected during the observations. In both studies, the type of observation was not specified. Observations were generally recorded as field notes.
In 3 studies, various qualitative public documents were studied. 15 , 19 , 22 These documents included role description, education curriculum, governance frameworks, websites, and newspapers with information about the implementation of the role and general practice. Only 1 study failed to specify the type of document and the collected data. 15
In 1 study, qualitative documentation was investigated. 17 This included a review of dashboards (eg, provider productivity reports or provider quality dashboards in the electronic health record) and quality performance reports (eg, practice-wide or co-management team-wide performance reports).
This section describes the between/across methods, which involve employing both qualitative and quantitative data-collection procedures in the same study. 6 , 7 This procedure can also be denoted “methodologic triangulation.” 8 Subsequently, we present the individual data-collection procedures. In 3 studies, information on between/across triangulation was found. 16 , 20 , 21
Three studies used qualitative and quantitative data-collection procedures. One study combined face-to-face interviews, documentation, and self-assessments. 16 One study employed semi-structured interviews, direct observation, documents, and service records, 20 and another study combined face-to-face interviews, non-participant observation, documents, and questionnaires. 23
All 3 studies used qualitative interviews as the primary data-collection procedure. 16 , 20 , 23 Face-to-face and semi-structured interviews were conducted. In the interviews, data were collected on the introduction of new care services and experiences of barriers to and facilitators of collaborative work in general practices.
In 2 studies, direct and non-participant qualitative observations were conducted. 20 , 23 During the observations, the interaction between health professionals or the organization and the clinical context was observed. Observations were generally recorded as field notes.
In 2 studies, various qualitative public documents were examined. 20 , 23 These documents included role description, newspapers, websites, and practice documents (eg, flyers). In the documents, information on the role implementation and role description of NPs was collected.
In 1 study, qualitative individual journals were studied. 16 These included reflective journals from NPs, who performed the role in primary health care.
Only 1 study involved quantitative service records. 20 These service records were obtained from the primary care practices and the respective health authorities. They were collected before and after the implementation of an NP role to identify changes in patients’ access to health care, the volume of patients served, and patients’ use of acute care services.
In 2 studies, quantitative questionnaires were used to gather information about the teams’ satisfaction with collaboration. 16 , 21 In 1 study, 3 validated scales were used. The scales measured experience, satisfaction, and belief in the benefits of collaboration. 21 Psychometric performance indicators of these scales were provided. However, the time points of data collection were not specified; similarly, whether the questionnaires were completed online or by hand was not mentioned. A competency self-assessment tool was used in another study. 16 The assessment comprised 70 items and included topics such as health promotion, protection, disease prevention and treatment, the NP-patient relationship, the teaching-coaching function, the professional role, managing and negotiating health care delivery systems, monitoring and ensuring the quality of health care practice, and cultural competence. Psychometric performance indicators were provided. The assessment was completed online with 2 measurement time points (pre self-assessment and post self-assessment).
This section describes data-analysis triangulation, which involves the combination of 2 or more methods of analyzing data. 6 Subsequently, we present within-case analysis and cross-case analysis.
Three studies combined qualitative and quantitative methods of analysis. 16 , 20 , 21 Two studies involved deductive and inductive qualitative analysis, and qualitative data were analyzed thematically. 20 , 21 One used deductive qualitative analysis. 16 The method of analysis was not specified in the studies. Quantitative data were analyzed using descriptive statistics in 3 studies. 16 , 20 , 23 The descriptive statistics comprised the calculation of the mean, median, and frequencies.
Two studies combined deductive and inductive qualitative analysis, 19 , 22 and 2 studies only used deductive qualitative analysis. 15 , 18 Qualitative data were analyzed thematically in 1 study, 22 and data were treated with content analysis in the other. 19 The method of analysis was not specified in the 2 studies.
In 7 studies, a within-case analysis was performed. 15 - 20 , 22 Six studies used qualitative data for the within-case analysis, and 1 study employed qualitative and quantitative data. Data were analyzed separately, consecutively, or in parallel. The themes generated from qualitative data were compared and then summarized. The individual cases were presented mostly as a narrative description. Quantitative data were integrated into the qualitative description with tables and graphs. Qualitative and quantitative data were also presented as a narrative description.
Of the multiple-case studies, 5 carried out cross-case analyses. 15 - 17 , 20 , 22 Three studies described the cross-case analysis using qualitative data. Two studies reported a combination of qualitative and quantitative data for the cross-case analysis. In each multiple-case study, the individual cases were contrasted to identify the differences and similarities between the cases. One study did not specify whether a within-case or a cross-case analysis was conducted. 23
This section describes confirmation or contradiction through qualitative and quantitative data. 1 , 4 Qualitative and quantitative data were reported separately, with little connection between them. As a result, the conclusions on neither the comparisons nor the contradictions could be clearly determined.
In 3 studies, the consistency of the results of different types of qualitative data was highlighted. 16 , 19 , 21 In particular, documentation and interviews or interviews and observations were contrasted:
Both types of data showed that NPs and general practitioners wanted to have more time in common to discuss patient cases and engage in personal exchanges. 21 In addition, the qualitative and quantitative data confirmed the individual progression of NPs from less competent to more competent. 16 One study pointed out that qualitative and quantitative data obtained similar results for the cases. 20 For example, integrating NPs improved patient access by increasing appointment availability.
Although questionnaire results indicated that NPs and general practitioners experienced high levels of collaboration and satisfaction with the collaborative relationship, the qualitative results drew a more ambivalent picture of NPs’ and general practitioners’ experiences with collaboration. 21
The studies included in this scoping review evidenced various research questions. The recommended formats (ie, how or why questions) were not applied consistently. Therefore, no case study design should be applied because the research question is the major guide for determining the research design. 2 Furthermore, case definitions and designs were applied variably. The lack of standardization is reflected in differences in the reporting of these case studies. Generally, case study research is viewed as allowing much more freedom and flexibility. 5 , 24 However, this flexibility and the lack of uniform specifications lead to confusion.
Methodologic triangulation, as described in the literature, can be somewhat confusing as it can refer to either data-collection methods or research designs. 6 , 8 For example, methodologic triangulation can allude to qualitative and quantitative methods, indicating a paradigmatic connection. Methodologic triangulation can also point to qualitative and quantitative data-collection methods, analysis, and interpretation without specific philosophical stances. 6 , 8 Regarding “data-collection methods with no philosophical stances,” we would recommend using the wording “data source triangulation” instead. Thus, the demarcation between the method and the data-collection procedures will be clearer.
Yin 1 advocated the use of multiple sources of evidence so that a case or cases can be investigated more comprehensively and accurately. Most studies included multiple data-collection procedures. Five studies employed a variety of qualitative data-collection procedures, and 3 studies used qualitative and quantitative data-collection procedures (mixed methods). In contrast, no study contained 2 or more quantitative data-collection procedures. In particular, quantitative data-collection procedures—such as validated, reliable questionnaires, scales, or assessments—were not used exhaustively. The prerequisites for using multiple data-collection procedures are availability, the knowledge and skill of the researcher, and sufficient financial funds. 1 To meet these prerequisites, research teams consisting of members with different levels of training and experience are necessary. Multidisciplinary research teams need to be aware of the strengths and weaknesses of different data sources and collection procedures. 1
When using multiple data sources and analysis methods, it is necessary to present the results in a coherent manner. Although the importance of multiple data sources and analysis has been emphasized, 1 , 5 the description of triangulation has tended to be brief. Thus, traceability of the research process is not always ensured. The sparse description of the data-analysis triangulation procedure may be due to the limited number of words in publications or the complexity involved in merging the different data sources.
Only a few concrete recommendations regarding the operationalization of the data-analysis triangulation with the qualitative data process were found. 25 A total of 3 approaches have been proposed 25 : (1) the intuitive approach, in which researchers intuitively connect information from different data sources; (2) the procedural approach, in which each comparative or contrasting step in triangulation is documented to ensure transparency and replicability; and (3) the intersubjective approach, which necessitates a group of researchers agreeing on the steps in the triangulation process. For each case study, one of these 3 approaches needs to be selected, carefully carried out, and documented. Thus, in-depth examination of the data can take place. Farmer et al 25 concluded that most researchers take the intuitive approach; therefore, triangulation is not clearly articulated. This trend is also evident in our scoping review.
Few studies in this scoping review used a combination of qualitative and quantitative analysis. However, creating a comprehensive stand-alone picture of a case from both qualitative and quantitative methods is challenging. Findings derived from different data types may not automatically coalesce into a coherent whole. 4 O’Cathain et al 26 described 3 techniques for combining the results of qualitative and quantitative methods: (1) developing a triangulation protocol; (2) following a thread by selecting a theme from 1 component and following it across the other components; and (3) developing a mixed-methods matrix.
The most detailed description of the conducting of triangulation is the triangulation protocol. The triangulation protocol takes place at the interpretation stage of the research process. 26 This protocol was developed for multiple qualitative data but can also be applied to a combination of qualitative and quantitative data. 25 , 26 It is possible to determine agreement, partial agreement, “silence,” or dissonance between the results of qualitative and quantitative data. The protocol is intended to bring together the various themes from the qualitative and quantitative results and identify overarching meta-themes. 25 , 26
The “following a thread” technique is used in the analysis stage of the research process. To begin, each data source is analyzed to identify the most important themes that need further investigation. Subsequently, the research team selects 1 theme from 1 data source and follows it up in the other data source, thereby creating a thread. The individual steps of this technique are not specified. 26 , 27
A mixed-methods matrix is used at the end of the analysis. 26 All the data collected on a defined case are examined together in 1 large matrix, paying attention to cases rather than variables or themes. In a mixed-methods matrix (eg, a table), the rows represent the cases for which both qualitative and quantitative data exist. The columns show the findings for each case. This technique allows the research team to look for congruency, surprises, and paradoxes among the findings as well as patterns across multiple cases. In our review, we identified only one of these 3 approaches in the study by Roots and MacDonald. 20 These authors mentioned that a causal network analysis was performed using a matrix. However, no further details were given, and reference was made to a later publication. We could not find this publication.
Because it focused on the implementation of NPs in primary health care, the setting of this scoping review was narrow. However, triangulation is essential for research in this area. This type of research was found to provide a good basis for understanding methodologic and data-analysis triangulation. Despite the lack of traceability in the description of the data and methodological triangulation, we believe that case studies are an appropriate design for exploring new nursing roles in existing health care systems. This is evidenced by the fact that case study research is widely used in many social science disciplines as well as in professional practice. 1 To strengthen this research method and increase the traceability in the research process, we recommend using the reporting guideline and reporting checklist by Rodgers et al. 9 This reporting checklist needs to be complemented with methodologic and data-analysis triangulation. A procedural approach needs to be followed in which each comparative step of the triangulation is documented. 25 A triangulation protocol or a mixed-methods matrix can be used for this purpose. 26 If there is a word limit in a publication, the triangulation protocol or mixed-methods matrix needs to be identified. A schematic representation of methodologic and data-analysis triangulation in case studies can be found in Figure 2 .
Schematic representation of methodologic and data-analysis triangulation in case studies (own work).
This study suffered from several limitations that must be acknowledged. Given the nature of scoping reviews, we did not analyze the evidence reported in the studies. However, 2 reviewers independently reviewed all the full-text reports with respect to the inclusion criteria. The focus on the primary care setting with NPs (master’s degree) was very narrow, and only a few studies qualified. Thus, possible important methodological aspects that would have contributed to answering the questions were omitted. Studies describing the triangulation of 2 or more quantitative data-collection procedures could not be included in this scoping review due to the inclusion and exclusion criteria.
Given the various processes described for methodologic and data-analysis triangulation, we can conclude that triangulation in case studies is poorly standardized. Consequently, the traceability of the research process is not always given. Triangulation is complicated by the confusion of terminology. To advance case study research in nursing, we encourage authors to reflect critically on methodologic and data-analysis triangulation and use existing tools, such as the triangulation protocol or mixed-methods matrix and the reporting guideline checklist by Rodgers et al, 9 to ensure more transparent reporting.
Acknowledgments.
The authors thank Simona Aeschlimann for her support during the screening process.
The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
Funding: The author(s) received no financial support for the research, authorship, and/or publication of this article.
Supplemental Material: Supplemental material for this article is available online.
Antimicrobial Resistance & Infection Control volume 13 , Article number: 95 ( 2024 ) Cite this article
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There is an ongoing controversy regarding whether single-occupancy rooms are superior to multiple-occupancy rooms in terms of infection prevention. We investigated whether treatment in a multiple-occupancy room is associated with an increased incidence of nosocomial coronavirus disease 2019 (COVID-19) compared with treatment in a single-occupancy room.
In this retrospective cohort study, every hospitalization period of adult patients aged ≥ 18 years at a tertiary hospital in Korea from January 1, 2022, to December 31, 2022, was analyzed. If COVID-19 was diagnosed more than 5 days after hospitalization, the case was classified as nosocomial. We estimated the association between the number of patients per room and the risk of nosocomial COVID-19 using a Cox proportional hazards regression model.
In total, 25,143 hospitalizations per room type were analyzed. The incidence rate of nosocomial COVID-19 increased according to the number of patients per room; it ranged from 3.05 to 38.64 cases per 10,000 patient-days between single- and 6-bed rooms, respectively. Additionally, the hazard ratios of nosocomial COVID-19 showed an increasing trend according to the number of patients per room, ranging from 0.14 (95% confidence interval 0.001–1.03) to 2.66 (95% confidence interval 1.60–4.85) between single- and 6-bed rooms, respectively.
We demonstrated that the incidence of nosocomial COVID-19 increased according to the number of patients per room. To reduce nosocomial infections by respiratory viruses, the use of multiple-occupancy rooms should be minimized.
Nosocomial spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was reported during the coronavirus disease 2019 (COVID-19) pandemic [ 1 , 2 ]. To prevent nosocomial spread, many hospitals implemented additional strategies beyond the standard precautions. These included testing all patients on admission, improving ventilation, ensuring universal masking, encouraging vaccination of patients and healthcare workers, and isolating patients with confirmed COVID-19 [ 3 , 4 ].
Patients admitted to multiple-occupancy rooms have a higher risk of encountering other patients with transmissible infectious diseases relative to patients in single-occupancy rooms [ 5 , 6 ]. Some studies have demonstrated that the use of single-occupancy rooms significantly reduces the rates of colonization of multidrug-resistant organisms (MDROs) and healthcare-associated infection, such as bloodstream infection or Clostridium difficile infection, compared with treatment in multiple-occupancy rooms [ 7 , 8 , 9 ]. However, there is still controversy regarding the advantages of single-occupancy rooms in reducing multidrug-resistant organism colonization and healthcare-associated infection. This controversy has arisen because most previous studies had low levels of evidence and included many confounding variables, thus hindering interpretation [ 10 , 11 , 12 , 13 ].
MDROs mainly spread via contaminated hands and the environment. In contrast, respiratory viruses, including influenza virus and SARS-CoV-2, mainly spread by droplets or aerosols. Few studies have examined the impact of multiple-occupancy rooms on nosocomial transmission of respiratory viruses. In one previous study, the incidences of nosocomial influenza were 2.0 and 0.7 for 100 patient-days in double- and single-occupancy rooms, respectively [ 5 ]. Several studies have revealed that treatment in multiple-occupancy rooms is a risk factor for nosocomial COVID-19 [ 14 , 15 , 16 , 17 , 18 ]. This study aimed to investigate the impact of multiple-occupancy rooms on the incidence of nosocomial COVID-19.
This retrospective observational study was conducted at a tertiary hospital in Seoul, South Korea. This is an 1803-bed university-affiliated hospital with 1367 non-intensive care unit beds for adults, 126 (9.2%) single-bed rooms, 364 (26.6%) 2-bed rooms, 39 (2.9%) 3-bed rooms, 184 (13.5%) 4-bed rooms, 120 (8.8%) 5-bed rooms, and 534 (39.0%) 6-bed rooms. In multiple-occupancy rooms, the beds were placed 7 feet apart and separated by curtains. Among the 126 single-bed rooms, 35 (27.8%) were located in wards with only single-bed rooms, while 91 (72.2%) were located in wards with both single- and multi-bed rooms. This study was performed from January 1, 2022, to December 31, 2022, when the number of confirmed COVID-19 cases was at its peak in Korea. The Delta variant was dominant until January 2022; thereafter, the Omicron BA.1, BA.2, and BA.5 variants were dominant [ 19 ].
During the study period, a SARS-CoV-2 polymerase chain reaction (PCR) assay was performed before hospitalization of all patients, and patients were admitted after a negative result had been confirmed. If the SARS-CoV-2 PCR assay result was positive on admission for patients whose admission was inevitable, those patients were isolated in single-occupancy rooms. Visitors’ access was restricted to individuals with a negative PCR test result obtained within 48 h. Universal masking of patients and healthcare workers was implemented, and vaccination of patients and healthcare workers was encouraged. In addition to screening for all admissions, the SARS-CoV-2 PCR assay was repeated if patients had a fever and/or respiratory symptoms. Patients diagnosed with COVID-19 during admission were isolated in single-occupancy rooms with negative pressure when available, otherwise, single-occupancy rooms without negative pressure were used. Healthcare workers adhered to standard, contact, and droplet precautions for all COVID-19 patients. Airborne precautions were implemented during aerosol-generating procedures. Personal protective equipment included KF94 or equivalent respirators, face shields or goggles, non-sterile gloves, and isolation gowns. During aerosol-generating procedures, N95 or equivalent respirators were used.
When COVID-19 was confirmed in a patient in a multiple-occupancy room, all patients sharing the room were tested with the SARS-CoV-2 PCR assay during the infectious window (defined as 48 h before symptom onset or a positive test in the absence of symptoms). Exposed roommates were placed on droplet precautions if they were inpatients, or on home quarantine if they were being discharged, for 14 days after their last exposure. Considering the median incubation period < 7 days, the quarantine period was reduced to 7 days during the late study period.
A case of COVID-19 was defined as a positive SARS-CoV-2 PCR assay result using any respiratory specimens. Patients with a recent history of infection were categorized according to national guidelines, which were based on the Centers for Disease Control and Prevention protocol, as follows [ 20 , 21 ]. Reinfection was defined as a positive test more than 90 days after the last diagnosis (with or without symptoms), a positive test 45–89 days after the last diagnosis (with symptoms), or a history of exposure to a patient with a confirmed positive test result. All other cases were classified as re-positivity. Cases were classified as nosocomial if diagnosed more than 5 days after hospitalization.
Hospital rooms were classified as 1A, 1B, 2, 3, 4, 5, or 6 according to the number of patients per room. 1A refers to a single-bed room in an all single-bed room ward, whereas 1B refers to a single-bed room in a mixed single- and multi-bed room ward.
We retrospectively reviewed the hospitalization periods of adult patients aged ≥ 18 years from January 1, 2022, to December 31, 2022. All hospitalization periods were divided according to the hospital room type. Hospitalization periods were excluded from the analysis based on the following criteria.
If the length of stay in one hospital room was < 5 days, the hospitalization period for that room was excluded.
Hospitalization periods in intensive care units (ICUs) were excluded.
Hospitalization periods after the diagnosis of nosocomial COVID-19 (including periods at the time of re-admission) were excluded.
If nosocomial COVID-19 was diagnosed within 5 days after a room change, hospitalization periods in the pre-and post-movement rooms were excluded.
Hospitalization periods for patients with community-acquired COVID-19 and those with re-positivity results were excluded.
If a patient was hospitalized multiple times during the study period, each hospitalization was included in the analysis.
The following variables were extracted from SUPREME ® , a clinical data warehouse at the study hospital: age, sex, underlying diseases, date of admission, date of discharge, hospitalization room, and SARS-CoV-2 reverse-transcription PCR assay results. Underlying disease data were extracted using International Classification of Diseases 10th revision codes, including diabetes mellitus, chronic kidney disease, cardiovascular disease, heart failure, cerebrovascular accident, liver cirrhosis, chronic obstructive pulmonary disease, interstitial lung disease, rheumatologic disease, asthma, hematologic malignancy, solid malignancy, solid organ transplantation, and hematopoietic stem cell transplantation. Patients were considered vaccinated if they had completed the primary series or received booster vaccinations [ 22 ].
Patients’ baseline characteristics were compared across all study groups using the absolute standardized difference (ASD). ASDs of < 0.1 and > 0.25 indicated negligible and large differences, respectively, in the mean or proportion of covariates between two groups [ 23 ]. Statistical significance was defined as a mean ASD of > 0.15 and maximum ASD of > 0.3.
To estimate the incidence rates of nosocomial COVID-19 per room type, the hospitalization period per room was used to calculate the follow-up time when estimating the incidence, with the hospitalization period per room regarded as the analysis unit. The incidence rate was defined as the sum of nosocomial COVID-19 incident cases divided by the total follow-up time. A Poisson regression model was used to test the trend in incidence rate of nosocomial COVID-19 according to the number of patients per room.
The association between the number of patients per room and the risk of nosocomial COVID-19 was estimated using a Cox proportional hazards regression model. Age, sex, and underlying diseases were included in the multivariable model.
Although the vaccination status was an important variable, it could not be extracted from the database of the clinical data warehouse, and it was not feasible to check the vaccination histories of all patients. As an alternative, we reviewed the vaccination histories of all patients with confirmed nosocomial COVID-19. Based on these results, we assumed the vaccination rate of the remaining patients and calculated the number of patients required to estimate the vaccination rate using a precision rate of 5% and the 95% confidence interval (CI). We then reviewed the vaccination histories of the remaining randomly sampled patients. The weighted vaccination rates according to room type were estimated via multiplication of the vaccination rates of patients with and without nosocomial COVID-19 by their sampling weights. Sampling weights were calculated as the inverse of the sampling fraction (number of data points with vaccination information/number of analysis data) per room type and nosocomial COVID-19 status.
Subgroup analysis was performed among patients with known vaccination information to determine the association, adjusted for vaccination status and the above-listed variables. The association was estimated by fitting a Cox proportional hazards model, weighted using the sampling weight.
We also performed sensitivity analysis using a diagnostic cut-off for nosocomial COVID-19 set at 10 days after the date of admission.
Statistical analyses were conducted with support from the Medical Research Collaboration Center and performed using SAS version 9.4 (SAS Institute Inc., Cary, NC, USA), IBM SPSS Statistics for Windows, version 28.0 (IBM Corp., Armonk, NY, USA), and PASS 2022, v22.0.2 (NCSS, LLC, Kaysville, UT, USA). The threshold for statistical significance was regarded as P < 0.05.
This study protocol was approved by the Institutional Review Board (IRB No. H-2308-016-1454) and Data Review Board (DRB No. DRB-E(I)-2023-08-07) of Seoul National University Hospital. The requirement for informed consent was waived because of the retrospective nature of the study.
During the study period, 80,702 patients aged ≥ 18 years were hospitalized. Of these patients, 67,890 stayed in only one room type during hospitalization; 12,812 (15.9%) were transferred and stayed in two or more room types during hospitalization. Considering room transfers, 99,797 hospitalizations were analyzed. Among these hospitalizations, we excluded those for which the length of stay was < 5 days (n = 73,214), admissions to intensive care units (n = 1087), hospitalization periods occurring after nosocomial COVID-19 (n = 241), those for which the hospitalization room was a pre- or post-transfer room when nosocomial COVID-19 had been diagnosed within 5 days of transfer (n = 31), and those in which patients were diagnosed with community-acquired COVID-19 or had re-positivity results (n = 81). Finally, 22,757 hospitalizations of 18,577 patients remained. Among these, 1918 (8.4%) patients underwent room transfers, and 25,143 hospitalizations per room type were analyzed (Fig. 1 ).
Study flow diagram and examples of exclusion process. Abbreviations; COVID-19: coronavirus disease-2019, ICU: intensive care unit. a 1A: single-bed room in an all single-bed room ward; 1B: single-bed room in a mixed single- and multi-bed rooms ward. During the study period, there were 99,797 hospitalizations per room type. After excluding hospitalizations according to the eligibility criteria, we analyzed 25,143 hospitalizations per room type. Each exclusion criterion was explained by category
The number of hospitalizations per room type and the patients’ baseline characteristics are shown in Table 1 . Seven baseline covariates (age, sex, diabetes mellitus, chronic kidney disease, cardiovascular disease, solid malignancy, and duration of hospitalization) showed large standardized differences regarding means or proportions (mean ASD > 0.15 and maximum ASD > 0.3).
The vaccination rate among patients with nosocomial COVID-19 ranged from 0.0 to 85.1% (Table 2 a). Based on this finding, we assumed a vaccination rate of 80% for the remaining patients and calculated that 246 patients per room type would be required to estimate the vaccination rate with a precision rate of 5% and the 95% CI. Among the randomly sampled 246 patients without nosocomial COVID-19, the vaccination rate ranged from 78.0 to 89.8% (Table 2 b). The estimated vaccination rates per room type were as follows: 1A rooms, 88.8% (95% CI 84.7–92.8); 1B rooms, 84.2% (95% CI 79.7–88.7); 2-bed rooms, 88.0% (95% CI 84.0–91.9); 3-bed rooms, 89.3% (95% CI 85.6–93.1); 4-bed rooms, 77.7% (95% CI 72.6–82.8); 5-bed rooms, 90.3% (95% CI 86.7–93.9); and 6-bed rooms, 88.1% (95% CI 84.2–92.1) (Table 2 c). Overall, vaccination coverage did not significantly differ between patients in single- and multiple-occupancy rooms; however, patients in 4-bed rooms had a lower vaccination rate than patients in the other rooms ( P < 0.001).
During the 138,997 patient-days of observation, 401 cases of nosocomial COVID-19 were diagnosed. The incidence rate of nosocomial COVID-19 tended to increase according to the number of patients per room, ranging from 3.05 to 38.64 cases per 10,000 patient-days in single- to 6-bed rooms, respectively ( P < 0.001, Table 3 ).
The results of multivariable Cox proportional hazards regression are shown in Table 4 . Using 1B rooms as the reference, we observed an increasing trend in the hazard ratios of nosocomial COVID-19 according to the number of patients per room from 0.14 for 1A rooms to 2.66 for 6-bed rooms ( P < 0.001). Furthermore, the hazard ratios were significantly higher for rooms with ≥ 5 patients than for 1B rooms.
Subgroup analysis, focusing solely on 2627 patients with a known vaccination status, also revealed an increasing trend in the hazard ratio of nosocomial COVID-19 according to the number of patients per room (Supplementary Table 1).
The results of sensitivity analysis, using a diagnostic cut-off for nosocomial COVID-19 set at 10 days after the date of admission, are shown in Supplementary Table 2. The tendency for the risk of nosocomial COVID-19 to increase according to the number of patients per room persisted regardless of the definition of nosocomial COVID-19.
Higher nosocomial COVID-19 rates were detected among patients in multiple-occupancy rooms than among those in single-occupancy rooms. A dose–response relationship was present between the number of patients in a room and the incidence of nosocomial COVID-19. These findings suggest a strong correlation between treatments in multiple-occupancy rooms and the acquisition of SARS-CoV-2 infection.
This study was conducted in Korea in 2022. The prevalence of COVID-19 was relatively low in Korea until late 2021 because of aggressive testing, contact tracing, strict quarantine policies, and high vaccination rates. Despite the high vaccination rates, the prevalence abruptly increased in February 2022 due to the emergence of highly transmissible Omicron variants [ 24 , 25 ]. The incidence of nosocomial COVID-19 increased during the community-wide Omicron outbreak compared with the Delta outbreak [ 26 , 27 ]. We believe that the predominance of highly transmissible Omicron variants in the community highlights the impact of multiple-occupancy rooms on nosocomial COVID-19.
We applied several exclusion criteria, some of which require explanation. ICU stays were excluded due to distinct differences in patient care compared to general wards. The ICU was an open shared space with 10–25 beds, lower patient-to-nurse ratio, and higher patient turnover compared to general wards. In addition, hospitalization periods in pre-and post-movement rooms were excluded when nosocomial COVID-19 was diagnosed within 5 days of a room change. Considering the SARS CoV-2 incubation period of 2–14 days, it was unclear whether transmission occurred before or after the room change. To minimize misclassification, the pre-movement period was excluded.
The criteria for defining nosocomial COVID-19 have not yet been standardized. The incubation period of wild type SARS-CoV-2 ranges from 2 to 14 days (median, 5.1 days) [ 28 ], and that of the Omicron variant is shorter [ 29 , 30 ]. In this study, we selected 5 days after hospitalization as the cut-off for diagnosing nosocomial COVID-19 to cover the median incubation period for COVID-19; this approach also avoided underestimating the incidence of nosocomial COVID-19 [ 28 ]. Other studies also defined nosocomial COVID-19 as a positive SARS-CoV-2 PCR result 5 days after admission in patients who had a negative PCR result on admission [ 14 , 31 ]. When we separately analyzed the data using 10 days as the cut-off (which encompassed 95% of the incubation period), the trends were consistent (Supplementary Table 2).
SARS-CoV-2 mainly spreads through respiratory droplets and/or aerosols; it less frequently spreads through environmental contamination [ 32 , 33 ]. The spread of SARS-CoV-2 after exposure to rooms with multiple occupancies has also been reported [ 1 , 2 , 15 , 34 , 35 , 36 ]. The rate of a second attack rate after exposure to SARS-CoV-2 in a shared room ranges from 19 to 40% [ 15 , 16 , 34 ]. Interventions performed to interrupt the nosocomial spread of respiratory viruses include rapid detection and isolation of patients with transmissible viruses, proper hand hygiene, improved ventilation, implementation of universal masking, and vaccination policies for patients and healthcare personnel [ 3 , 4 ]. Efforts to minimize the use of multiple-occupancy rooms are needed to reduce the nosocomial spread of pathogens transmitted by respiratory secretions. In a prospective observational study, double- or multi-occupancy rooms were independently associated with nosocomial influenza compared with single-occupancy rooms (adjusted odds ratio 3.42; 95% confidence interval 1.29–9.08) [ 37 ]. Another study showed that the relative risk of nosocomial influenza was 2.67 (95% confidence interval 1.05–6.76) in double-occupancy rooms compared with single-occupancy rooms [ 38 ]. We found that the incidence of nosocomial COVID-19 increased according to the number of patients in a room. Patients in shared rooms have minimal close contact with their roommates. Therefore, transmission to roommates might occur via respiratory droplets or aerosols despite universal masking of patients, curtains between patients, and a mean separation distance of 7 feet. A higher number of patients in a room is associated with greater risk of exposure to patients with asymptomatic or symptomatic COVID-19. The incidence of nosocomial COVID-19 was lowest in wards containing only single-bed rooms (1A ward). This suggests that less crowded wards are beneficial for reducing the spread of nosocomial COVID-19. If a patient in a multi-occupancy room had fever or respiratory symptoms in the present study, diagnostic tests were immediately performed to detect COVID-19 and isolate patients with newly detected COVID-19. To minimize nosocomial transmission, droplet precautions were implemented for roommates of COVID-19 patients for 14 days, consistent with the longest incubation period of SARS-CoV-2. However, such efforts are insufficient to prevent the transmission of SARS-CoV-2 in multiple-occupancy rooms because nearly 60% of SARS-CoV-2 transmissions are attributable to asymptomatic or pre-symptomatic individuals [ 39 ]. Several published guidelines recommend single-occupancy rooms for refurbished or new hospital wards [ 40 , 41 ]. The proportion of single-occupancy hospital rooms has increased in many countries [ 42 , 43 ]. We suggest that an increased proportion of single-occupancy rooms is necessary to reduce the spread of nosocomial infections caused by respiratory droplets and/or aerosols.
Although this study demonstrated the impact of multiple-occupancy rooms on the nosocomial spread of COVID-19, it had several limitations. First, we did not analyze genetic relationships of SARS-CoV-2 via molecular methods to confirm spread in shared rooms. Some patients may have been infected by people other than their roommates. Second, we could not investigate the vaccination histories of all patients, although the vaccination rate is an important factor influencing the incidence of nosocomial COVID-19. To minimize this limitation, we examined the vaccination histories of all patients with confirmed COVID-19; we found no significant differences between patients in single- or multiple-occupancy rooms. We also performed a separate analysis of 2627 patients whose vaccination history information was available; the results were consistent with the initial analysis. Third, as mentioned above, the cut-off days to define nosocomial COVID-19 were not standardized. To minimize this limitation, we analyzed data using 10 days as the cut-off; the results were consistent with the initial analysis. Fourth, patients diagnosed with nosocomial COVID-19 after discharge may have been excluded. Fifth, as shown in Fig. 1 , a significant number of hospitalization periods were excluded to minimize misclassification. Although this reduced the sample size, the focus on patients with confidently determined nosocomial spread was prioritized. Considering the year-long study duration, a sufficient number of patients and observation time remained.
We have demonstrated that multiple-occupancy rooms play a role in the spread of nosocomial COVID-19. We suggest minimizing the use of multiple-occupancy rooms to facilitate infection control, especially concerning the spread of respiratory viruses within hospitals.
The data that support the findings of this study are available upon reasonable request.
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The authors thank Prof. Myoung-jin Jang of the Medical Research Collaborating Center (MRCC) at Seoul National University Hospital for the statistical analysis and consultation.
This work was supported in part by the Bio and Medical Technology Development Program of the National Research Foundation (NRF), the Korean government (MSIT) (grant number 2021M3A9I2080498), and the Creative-Pioneering Researchers Program through Seoul National University.
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Department of Internal Medicine, Seoul National University College of Medicine, 101 Daehak-ro Jongno-gu, Seoul, 03080, Republic of Korea
Hyeon Jae Jo, Pyoeng Gyun Choe, Minkyeong Lee, Jiyeon Bae, Chan Mi Lee, Chang Kyung Kang, Wan Beom Park & Nam Joong Kim
Infection Control Office, Seoul National University Hospital, Seoul, Republic of Korea
Pyoeng Gyun Choe, Ji Seon Kim, Mimi Lee & Nam Joong Kim
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Concept and design: Kim NJ, Choe PG, Jo HJ Acquisition, analysis, or interpretation of data: Kim NJ, Choe PG, Jo HJ, Lee MM, Kim JS Drafting of the manuscript: Kim NJ, Jo HJ Critical review of the manuscript for important intellectual content: Kim NJ, Park WB, Choe PG, Kang CK, Lee CM, Jo HJ, Bae JY, Lee MK Statistical analysis: Kim NJ, Choe PG, Jo HJ Obtained funding: Kim NJ, Park WB Administrative, technical, or material support: Kim NJ, Park WB, Bae JY, Lee MK, Lee MM, Kim JS Supervision: Kim NJ, Choe PG, Park WB, Kang CK, Lee CM.
Correspondence to Nam Joong Kim .
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Jo, H.J., Choe, P.G., Kim, J.S. et al. Risk of nosocomial coronavirus disease 2019: comparison between single- and multiple-occupancy rooms. Antimicrob Resist Infect Control 13 , 95 (2024). https://doi.org/10.1186/s13756-024-01454-w
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Uncertainty assessment of species distribution prediction using multiple global climate models on the tibetan plateau: a case study of gentiana yunnanensis and gentiana siphonantha.
2. materials and methods, 2.1. study area, 2.2. species data, 2.3. climate and environment data, 2.4. global climate models, 2.5. species distribution modeling, 3.1. model performance, 3.2. current potential distribution, 3.3. future potential distribution simulations, 3.3.1. impacts of gcms on sdm, 3.3.2. range shift under future climate change with mme-4, 4. discussion, 5. conclusions, author contributions, data availability statement, acknowledgments, conflicts of interest.
Click here to enlarge figure
GCM | Period | SSP | PercLoss * | PercGain ** | SRC *** |
---|---|---|---|---|---|
ACCESS-CM2 | 2041–2060 | SSP2-4.5 | 48.044 | 31.524 | −16.52 |
2041–2060 | SSP5-8.5 | 52.977 | 31.693 | −21.284 | |
2081–2100 | SSP2-4.5 | 60.382 | 39.043 | −21.339 | |
2081–2100 | SSP5-8.5 | 82.395 | 79.704 | −2.691 | |
CMCC-ESM2 | 2041–2060 | SSP2-4.5 | 36.285 | 57.186 | +20.901 |
2041–2060 | SSP5-8.5 | 42.388 | 43.684 | +1.296 | |
2081–2100 | SSP2-4.5 | 56.526 | 55.463 | −1.063 | |
2081–2100 | SSP5-8.5 | 75.51 | 109.853 | +34.342 | |
MPI-ESM1-2-HR | 2041–2060 | SSP2-4.5 | 26.371 | 26.623 | +0.252 |
2041–2060 | SSP5-8.5 | 33.978 | 26.487 | −7.491 | |
2081–2100 | SSP2-4.5 | 38.659 | 32.557 | −6.102 | |
2081–2100 | SSP5-8.5 | 67.043 | 75.848 | +8.805 | |
UKESM1-0-LL | 2041–2060 | SSP2-4.5 | 52.019 | 49.915 | −2.104 |
2041–2060 | SSP5-8.5 | 61.284 | 62.254 | +0.969 | |
2081–2100 | SSP2-4.5 | 67.6 | 81.549 | +13.949 | |
2081–2100 | SSP5-8.5 | 90.564 | 87.737 | −2.827 |
GCM | Period | SSP | PercLoss * | PercGain ** | SRC *** |
---|---|---|---|---|---|
ACCESS-CM2 | 2041–2060 | SSP2-4.5 | 11.835 | 15.244 | +3.409 |
2041–2060 | SSP5-8.5 | 14.424 | 16.181 | +1.757 | |
2081–2100 | SSP2-4.5 | 18.563 | 16.316 | −2.247 | |
2081–2100 | SSP5-8.5 | 43.152 | 11.929 | −31.223 | |
CMCC-ESM2 | 2041–2060 | SSP2-4.5 | 9.645 | 12.267 | +2.622 |
2041–2060 | SSP5-8.5 | 10.643 | 13.915 | +3.272 | |
2081–2100 | SSP2-4.5 | 19.096 | 16.265 | −2.831 | |
2081–2100 | SSP5-8.5 | 40.618 | 13.833 | −26.784 | |
MPI-ESM1-2-HR | 2041–2060 | SSP2-4.5 | 5.414 | 12.431 | +7.016 |
2041–2060 | SSP5-8.5 | 7.447 | 14.406 | +6.959 | |
2081–2100 | SSP2-4.5 | 8.826 | 13.909 | +5.083 | |
2081–2100 | SSP5-8.5 | 20.353 | 15.44 | −4.912 | |
UKESM1-0-LL | 2041–2060 | SSP2-4.5 | 13.209 | 18.332 | +5.122 |
2041–2060 | SSP5-8.5 | 18.672 | 19.768 | +1.097 | |
2081–2100 | SSP2-4.5 | 25.129 | 18.764 | −6.365 | |
2081–2100 | SSP5-8.5 | 54.606 | 13.273 | −41.333 |
Bio1 (°C) | Bio5 (°C) | Bio6 (°C) | Bio12 (mm) | Bio16 (mm) | Bio17 (mm) | |
---|---|---|---|---|---|---|
G. yunnanensis | 6.70 (−0.14~15.40) | 17.53 (11.00~25.10) | −7.71 (−15.40~1.80) | 803.58 (638.00~943.00) | 406.55 (311.00~525.00) | 33.81 (10~60) |
G. siphonantha | −0.40 (−5.35~5.63) | 15.43 (−16.1~26.30) | −21.04 (−25.20~−16.30) | 397.26 (115.00~616.00) | 240.93 (70.00~375.00) | 6.26 (2.00~13.00) |
Species | Period | SSP | PercLoss * | PercGain ** | SRC *** |
---|---|---|---|---|---|
G. yunnanensis | 2041–2060 | SSP2-4.5 | 40.866 | 38.871 | −1.995 |
2041–2060 | SSP5-8.5 | 46.854 | 38.671 | −8.183 | |
2081–2100 | SSP2-4.5 | 55.218 | 51.176 | −4.042 | |
2081–2100 | SSP5-8.5 | 78.872 | 99.762 | +20.89 | |
G. siphonantha | 2041–2060 | SSP2-4.5 | 9.045 | 14.733 | +5.688 |
2041–2060 | SSP5-8.5 | 11.468 | 16.391 | +4.922 | |
2081–2100 | SSP2-4.5 | 16.657 | 16.572 | −0.085 | |
2081–2100 | SSP5-8.5 | 39.276 | 13.642 | −25.634 |
The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content. |
Song, Y.; Xu, X.; Zhang, S.; Chi, X. Uncertainty Assessment of Species Distribution Prediction Using Multiple Global Climate Models on the Tibetan Plateau: A Case Study of Gentiana yunnanensis and Gentiana siphonantha . Land 2024 , 13 , 1376. https://doi.org/10.3390/land13091376
Song Y, Xu X, Zhang S, Chi X. Uncertainty Assessment of Species Distribution Prediction Using Multiple Global Climate Models on the Tibetan Plateau: A Case Study of Gentiana yunnanensis and Gentiana siphonantha . Land . 2024; 13(9):1376. https://doi.org/10.3390/land13091376
Song, Yuxin, Xiaoting Xu, Shuoying Zhang, and Xiulian Chi. 2024. "Uncertainty Assessment of Species Distribution Prediction Using Multiple Global Climate Models on the Tibetan Plateau: A Case Study of Gentiana yunnanensis and Gentiana siphonantha " Land 13, no. 9: 1376. https://doi.org/10.3390/land13091376
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Gut Pathogens volume 16 , Article number: 45 ( 2024 ) Cite this article
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The use of gastrointestinal disease multiplex polymerase chain reaction (GI PCR) testing has become common for suspected gastrointestinal infection. Patients often test positive for multiple pathogens simultaneously through GI PCR, although the clinical significance of this is uncertain.
This retrospective cohort study investigated risk factors and clinical outcomes associated with detection of multiple (as opposed to single) pathogens on GI PCR. We included adult patients who underwent GI PCR testing from 2020 to 2023 and had one or more pathogens detected. We compared patients with multiple versus those with single pathogens and hypothesized that immunosuppression would be a risk factor for detection of multiple pathogens. We further hypothesized that, during the 90 days after GI PCR testing, patients with multiple pathogens would have worse clinical outcomes such as increased rates of emergency department (ED) visits, death, hospitalization, or ambulatory care visits.
GI PCR was positive in 1341 (29%) of tested patients; 356 patients had multiple pathogens and 985 had one pathogen. The most common pathogens included Enteropathogenic Escherichia coli (EPEC, 27%), norovirus (17%), and Enteroaggregative E. coli (EAEC, 14%) in both multi- and singly positive patients. Immunosuppression was not associated with multiple pathogens (adjusted odds ratio [aOR] 1.35, 95% CI 0.96, 1.86). The factors most associated with multiple pathogens were Hispanic ethnicity (OR 1.86, 95% CI 1.42, 2.45) and chronic kidney disease (OR 1.69, 95% CI 1.13, 2.49). Patients with multiple pathogens were more likely to have ED visits during the 90 days after GI PCR testing (40% vs. 32%, p < 0.01), but they were not more likely to die, be hospitalized, or to have ambulatory medical visits.
Immunosuppression was not associated with detection of multiple as opposed to single pathogens on GI PCR testing. There were worse clinical outcomes associated with detection of multiple pathogens, although these effects were modest.
The gastrointestinal disease multiplex polymerase chain reaction (GI PCR) is common and growing in popularity as a tool to diagnose diarrheal illnesses with greater sensitivity compared to traditional culture. Traditional culture-based testing rarely proves positive for more than one pathogen in a given sample, but GI PCR often detects co-infections with multiple diarrhea-causing pathogens. While GI PCR can identify co-infections, it is not always clear whether all detected pathogens are clinically relevant or if some represent colonization, particularly in patients with altered immune function [ 1 , 2 , 3 , 4 ]. This distinction is crucial as it can significantly impact clinical management decisions [ 5 ].
Despite widespread use of GI PCR, few studies have characterized the prevalence and types of organisms present in samples with multiple positive results. Additionally, there is a lack of understanding of the clinical implications of detecting multiple pathogens as opposed to a single pathogen on patient outcomes. This study aims to fill this knowledge gap and provide valuable insights into the interpretation of GI PCR results, especially in immunocompromised patients.
We hypothesized that immunocompromised patients would be at increased risk for multiple as opposed to single pathogens on GI PCR testing. In individuals with weakened immune systems, such as those with HIV/AIDS or undergoing cancer treatment or organ transplantation, the body’s normal defense mechanisms against colonization by gut pathogens are compromised [ 6 , 7 , 8 , 9 , 10 , 11 ]. Similarly, patients with comorbidities that disrupt the gut microbiome, such as cancer, diabetes, heart failure, chronic kidney disease, or inflammatory bowel disease (IBD), are more prone to enteric infections [ 9 , 12 , 13 , 14 , 15 , 16 , 17 , 18 ].
We further hypothesized that the presence of multiple pathogens would be associated with measurably worse clinical outcomes even after adjusting for other factors—i.e., that these patients would have true co-infection which would lead to increased healthcare utilization compared to singly-infected patients. A null hypothesis is that the detection of multiple pathogens usually represents colonization, and that such patients fare similarly to those with just one pathogen present [ 1 , 5 , 19 ].
By examining outcomes in those with multiple as opposed to single pathogens on GI PCR, we aimed to inform the clinical question of infection versus colonization. The overarching goal of the study was to guide future GI PCR testing decisions and to better interpret results when patients test positive for multiple enteric pathogens.
This was a single-center, retrospective cohort study conducted at Columbia University Irving Medical Center (CUIMC). Patients aged 18 years or older who had undergone a GI PCR test between February 2020 and March 2023 were included. Children were excluded because of the differences in gut pathogens affecting adults and children [ 20 ]. The primary analyses were focused on the subset of patients who tested positive for one or more pathogens (i.e., a positive GI PCR test result). In instances where multiple positive stool tests were recorded for a single patient, the first test result was selected to ensure that each included test represented a unique individual. To minimize loss to follow-up, only individuals who had received primary care or specialist outpatient care within the two-month period preceding the assay GI PCR test were included. The study protocol was approved by the institutional review board of CUIMC.
Patients were classified as testing positive for multiple pathogens if they had two or more organisms detected on GI PCR; they were classified positive for a single pathogen if only one organism was detected. The stool samples collected from the patients were processed using the FilmArray GI Panel (BioFire Diagnostics, Salt Lake City, UT) according to the manufacturer’s instructions. Freshly excreted stool samples were collected by nurses and an aliquot of stool was placed directly into Cary Blair transport media at the bedside. These samples were mixed with the manufacturer’s reagents, loaded onto a cartridge, and placed in the FilmArray instrument for automated analysis. The FilmArray GI Panel utilizes a closed-system disposable pouch to qualitatively detect DNA or RNA from 22 different gastrointestinal pathogens including bacteria, parasites, and viruses [ 21 ]. The treating physicians had access to the GI PCR results when formulating treatment plans for their patients.
The main focus of interest was immunosuppression, which was classified categorically. Patients were classified as immunosuppressed if they had auto-immune diseases, history of solid organ transplant, or if they took an immunosuppressive medication in the 90 days before GI PCR testing (Supplemental Table 1 ) [ 22 , 23 , 24 , 25 , 26 ].
Using automated queries of the electronic medical record, we gathered demographic, clinical characteristics, and comorbidities and classified them based on codes documented using the 10th revision of the International Statistical Classification of Diseases and Related Health Problems (ICD-10) coding system at the time of the GI PCR test (Supplemental Table 1 ). The ICD-10 system is used for billing in all U.S. healthcare settings and contains hierarchically structured medical diagnoses and reasons for healthcare visits [ 22 ]. (Supplemental Table 1 ). As of May 2024, ICD-10 is a medical classification list that standardizes disease and health condition coding across the globe and is maintained by the World Health Organization [ 27 ]. Age and BMI were split into quartiles. Laboratory values were defined as normal or abnormal based on the institutional laboratory reference ranges as of May 1, 2024 [ 28 ]. Age and serum markers were categorized to aid in risk stratification and clinical decision-making, providing clearer ranges for interpretation.
We compared clinical outcomes during the 90 days after GI PCR testing including mortality, hospitalization, ED visits, receipt of antibiotics, and ambulatory medicine visits, between groups testing positive for multiple versus single pathogens by gathering data from electronic medical records with automated queries and classifying outcomes as present or absent.
Continuous data were expressed as means with standard deviations (SD) or as medians with interquartile ranges if the data were not normally distributed. Data were compared using t-tests for continuous data or chi-squared tests or Fisher’s exact tests for categorical data. Two multivariable models were constructed. First, a model was constructed for the outcome of testing positive for multiple as opposed to single pathogens on GI PCR. This model included immunosuppression a priori, with additional variables added stepwise, retaining those in the final model that independently predicted multiple pathogens. Second, a model was constructed for each clinical outcome. The primary focus of interest in this model was testing positive for multiple as opposed to single pathogens and we additionally pre-specified that age, immunosuppression, and insurance status would be included because these factors are likely to associate with poor outcomes. Logistic regression modeling was used to investigate risk factors for detection of multiple as opposed to single pathogens on GI PCR. Crude (unadjusted) odds ratios were used for descriptive purposes and adjusted odds ratios were used to control for potential confounding variables and to estimate the independent effects of predictor variables. Two-tailed test with a p-value of ≤ 0.05 was considered statistically significant. All statistical analysis was performed using RStudio [ 44 ], using packages forestplot [ 45 ], lubridate [ 46 ], olsrr [ 47 ], vtable [ 48 ], checkmate [ 49 ], report [ 50 ], tibble [ 51 ], abind [ 52 ], R language and environment [ 53 ], Table 1 [ 54 ], reshape [ 55 ], ggplot2 [ 56 ], stringr [ 57 ], forcats [ 58 ], tidyverse [ 59 ], dplyr [ 60 ], purrr [ 61 ], readr [ 62 ], tidyr [ 63 ], and kableExtra [ 64 ].
There were 4704 patients who underwent GI PCR testing during the study period. Of these, 29% tested positive (either singly or multiply) and were included in the main analyses. The majority of patients were female (60%), with a median age of 53 years (IQR 35–68). Over half were White (52%), and nearly a quarter were Hispanic (24%), (Table 1 ).
Out of the total patients tested, 1341 (29%) had a positive result on the GI PCR test. Of those with a positive GI PCR test, 985 (73%) were positive for a single pathogen, while 356 (27%) had multiple pathogens detected. Among the identified pathogens, the most prevalent were Enteropathogenic E. coli (EPEC), norovirus, and Enteroaggregative E. coli (EAEC). These accounted for approximately 70% of GI PCR results in patients with a single pathogen detected and 60% of PCR results in patients with multiple pathogens detected (Fig. 1 ). Patients with multiple positive GI PCR were slightly more likely to be immunosuppressed without reaching statistical significance (19% vs 16%, p = 0.07). They were more likely to be Hispanic (38% vs. 24%, p < 0.01) and to have end-stage renal disease (12% vs. 8%, p = 0.01) (Table 1 ). Among those with multiple pathogens detected on GI PCR, heat maps showed that the pathogen combinations most often co-present were EPEC and EAEC, EAEC and norovirus, and EPEC and norovirus. Higher rates of observed compared to expected combinations of co-positivity were seen for Enterotoxigenic E. coli (ETEC) and EAEC, Shiga toxin-producing E. coli (STEC) and ETEC, STEC and EAEC, and Giardia and Campylobacter (all p < 0.01) (Fig. 2 ).
Pie chart analyses of the study population’s fecal samples. The left pie chart represents the distribution of pathogens in samples with only one detected pathogen, while the right pie chart shows the breakdown for samples containing multiple pathogens
Heat map illustrating the prevalence of co-infecting pathogens in patients with multi positive PCR results. Highlighted squares represent combinations of pathogens that occurred more frequently than expected, as determined by McNamar’s test with a statistical significance threshold of p < 0.05
In the final model, immunosuppression was not significantly associated with multiple pathogens (aOR 1.35, 95% CI 0.96–1.86) (Table 2 ). Hispanic ethnicity was associated with increased risk for multiple pathogens (aOR 1.86, 95% CI 1.42–2.45).
Within 90 days of GI PCR testing, 24 (0.5%) patients died, 568 (12%) recorded ED or urgent care visits, 2673 (57%) recorded ambulatory medicine visits, and 161 (3.4%) were hospitalized. Patients with multiple positive pathogens were more likely to have ED/urgent care visits compared to those with single positive PCR results (40% vs. 32%, p < 0.01) but were not more likely to experience any of the other outcomes (Fig. 3 ). Next, we used logistic regression modeling to investigate the independent association between multiple pathogens and 90 day ED visits. After adjusting for other factors, detection of multiple (as opposed to single) pathogens was associated with increased risk for ED visits (aOR 1.44, 95% CI 1.11–1.87) (Table 3 ). Other factors that were independently associated with ED visits were immunosuppression (aOR 1.95, 95% CI 1.43–2.66), and Medicaid insurance (aOR 2.51, 95% CI 1.74, 3.62). The rates of receiving an antibiotic prescription were similar between patients with multiple vs. single positive GI PCR results (33% vs 32%). When looking specifically at the rates of receiving two or more antibiotic prescriptions, patients with multiple positive results had slightly higher rates compared to those with a single positive result (23% vs 19%, p = 0.03).
Bar graph of the 90 day clinical outcomes or disease courses in patients with single (blue) or multiple (yellow) positive pathogen results on GI PCR assay. The graph compares the outcomes between patients with infections with a single organism versus patients with multiple concurrent infections
This study assessed the clinical significance of detecting multiple as opposed to single pathogens on the GI PCR test, a common occurrence that was observed in 24% of all positive tests. We assessed risk factors for multiple pathogens, including immunosuppression. We also characterized the prevalence and types of enteric infections and the differences in clinical course and outcomes, comparing patients who tested positive for multiple gut pathogens versus those who tested positive for one pathogen alone. Overall, the baseline characteristics and outcomes of the two groups were more similar than we expected. A priori, we hypothesized that patients positive for multiple pathogens would be more likely to be immunosuppressed and would have increased medical comorbidities. We found that immunosuppression was not statistically associated with multiple pathogens. Downstream from this, we found only very modest differences in clinical outcomes when comparing those with multiple pathogens versus a single pathogen. Patients positive for multiple pathogens, including the more commonly detected but less clinically relevant EAEC, had a slightly higher rate of emergency room visits than those positive for a single pathogen, suggesting a potential additional health burden. However, the overall similarity between these two groups in terms of risk factors and the lack of thorough measures of clinical outcomes, such as severity of disease, duration of symptoms, or antibiotic requirement, makes it difficult to conclusively determine whether co-infection with multiple enteric pathogens represents a substantial health burden or is more likely an incidental finding. The higher prevalence of EAEC, an organism with less certain clinical relevance, among patients with multiple pathogens further supports the notion that these co-infections may not necessarily lead to worse clinical outcomes. While the increased emergency room visits among patients with multiple pathogens points to some additional health burden, the clinical course after GI PCR testing otherwise appeared largely similar between the two groups.
In contradiction to our results, prior studies have suggested that immunocompromise is associated with multiple gut pathogens, although many prior studies focus on enteric viruses and on children [ 3 , 6 , 29 ]. Specific immunocompromised subpopulations including children who are solid organ transplant recipients [ 29 ], those with HIV/AIDS [ 9 , 12 ], and liver and stem cell transplant recipients [ 30 , 31 ] are associated with higher rate of multiple pathogens on stool testing. The use of corticosteroids has also been associated with an increased likelihood of multiple pathogens on GI PCR among patients with IBD [ 32 ]. In a study of GI PCR testing in patients with HIV, Axelrad et al. found that 25% of men who have sex with men patients had multiple gut pathogens regardless of their degree of immunosuppression [ 11 , 33 ]. Our study was not powered to look at specific categories of immunosuppression and it is likely that there was heterogeneity in the degree of immunosuppression within the diverse group of immunosuppressed patients included in the study.
Interestingly, Hispanic ethnicity was the most important predictor of multiple pathogens on GI PCR. Prior research has documented differences in microbiome structure between racial and ethnic groups [ 34 , 35 , 36 , 37 ]. Hispanic ethnicity may be associated with the detection of multiple pathogens on GI PCR due to a combination of host genetics, geographic location, and socioeconomic factors such as diet, living environment, pathogen exposures, access to medical care, travel, and other social constructs that shape the gut microbiome and influence susceptibility to enteric pathogens [ 35 , 36 , 37 , 38 ]. This study could not determine the specific factors underlying the association between Hispanic ethnicity and higher incidence of multiple pathogens on GI PCR testing.
Prior studies of viral diarrhea in children have suggested that there is greater severity of diarrhea when multiple viruses are detected, but less is known in adults and with bacterial enteropathogens [ 39 ]. After adjusting for other factors including age, insurance status, and immunosuppression, detection of multiple pathogens was associated with a 44% increased risk for subsequent ED visits compared to detection of a single pathogen. Those with multiple pathogens were also more likely to receive more than one antibiotic, although overall rates of antibiotic use were similar comparing those with multiple vs. single pathogens. There was no association between multiple pathogens and other clinical outcomes (death, hospitalization, or increased likelihood of an ambulatory care visit). Future diagnostics—particularly those using sequencing technologies—may provide more granular clinical information by reporting on the relative abundance of a given organism which could influence the decision of whether and how to treat.
When we looked at patterns of co-positivity, we found several pathogen pairs which appeared at a rate greater than expected by pure chance: ETEC and EAEC, STEC and ETEC, STEC and EAEC, and Giardia and Campylobacter . Whether these represent synergistic relationships or rather shared environmental risk factors is unknown. In prior studies, ETEC has been found to co-occur more often with EPEC, and with Campylobacter [ 40 ]. Prior studies have also suggested that bacteria-bacteria pairs appear together more frequently than virus-bacteria pairs [ 40 , 41 ]. It is plausible that viral-bacterial coinfection could augment the severity of diarrhea [ 42 ]. One study employed a cluster analysis and hierarchical clustering approach to PCR-based data and demonstrated that such co-infections were likely to be clinically relevant [ 43 ].
This study has strengths, and some limitations. This study builds on the limited body of existing research that investigates patient variables and clinical outcomes associated with multiple pathogens on GI PCR. It was relatively large and looked at the presence of multiple pathogens from several angles. Limitations include a retrospective design, lack of granular data related to hygiene and lifestyle factors which may influence GI PCR positivity, and lack of detailed patient symptom and severity data. Future studies should investigate the impact of GI pathogens on patient outcomes and explore strategies to prevent and manage these infections.
In conclusion, we found that patients testing positive for multiple pathogens on GI PCR did not exhibit substantially different baseline characteristics or clinical outcomes compared to those testing positive for a single pathogen. The unexpected finding of Hispanic ethnicity as a predictor of multiple pathogens highlights the complex interplay between environmental, socioeconomic factors, and enteric infections. Patients who tested positive for multiple pathogens were more likely to have ER visits afterwards compared to those who tested positive for single pathogens, but no other harm was observed to be associated with multiple pathogens (no increased rate of death or hospitalization). On balance, these results argue that in many multi-positive GI PCR patients, one or more of the organisms is likely to be a colonizer.
No datasets were generated or analysed during the current study.
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Insa Mannstadt
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Clinical Microbiology, Department of Pathology and Cell Biology, Columbia University Irving Medical Center, New York, NY, USA
Daniel A. Green
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Supplementary Material 1. Table 1: Immunosuppression classification criteria including ICD-10 codes related to immune-mediated disease and immunosuppressants in 90 days prior to PCR
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Mannstadt, I., Choy, A., Li, J. et al. Risk factors and clinical outcomes associated with multiple as opposed to single pathogens detected on the gastrointestinal disease polymerase chain reaction assay. Gut Pathog 16 , 45 (2024). https://doi.org/10.1186/s13099-024-00638-4
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A recent case report published in Cyborg Bionic Systems details the diagnosis of idiopathic normal pressure hydrocephalus (iNPH) using multimodality diagnostic approaches, highlighting significant advancements in medical diagnostics and patient care. The study conducted by a team of researchers from Tianjin Medical University General Hospital, Tianjin, China, presents a comprehensive case study of a 68-year-old male patient diagnosed with iNPH, showcasing the effectiveness of these advanced diagnostic techniques.
iNPH is a condition characterized by the accumulation of cerebrospinal fluid (CSF) causing ventricular dilation, often mistaken for brain atrophy due to similar symptoms such as cognitive impairment and gait disturbances. The prevalence of this condition increases with age, affecting approximately 1.30% of individuals over 65 and rising to 5.9% among those over 80.
In the documented case, the patient suffered from deteriorated gait, cognitive decline, and urinary incontinence , symptoms that gradually worsened over several years. Initially misdiagnosed, his condition prompted the use of multimodality diagnostic approaches after traditional methods provided inconclusive results. The diagnostic process included brain imaging, cerebrospinal fluid tap tests (CSFTT), continuous intracranial pressure monitoring, and a novel infusion study, which collectively led to an accurate diagnosis and subsequent treatment.
The infusion study, a critical component of the diagnosis, involves the measurement of cerebrospinal fluid resistance (Rcsf), which has been identified as a crucial physical marker for diagnosing hydrocephalus. In this case, an Rcsf level exceeding the normal range significantly indicated the presence of hydrocephalus, confirming the necessity for surgical intervention.
Following the diagnosis, the patient underwent a ventriculoperitoneal shunt surgery, which involves the insertion of a tube to drain excess CSF from the brain to the abdominal cavity. The surgery was successful, with the patient showing remarkable improvement in symptoms and overall quality of life.
This case underscores the vital role of multimodality diagnostic approaches in the medical field. Not only do these techniques enhance diagnostic accuracy, but they also reduce clinical costs and time spent on diagnosis, providing a quicker path to recovery for patients. The effectiveness of these approaches in complex cases like iNPH demonstrates their potential for broader application, promising significant improvements in the diagnosis and treatment of similar conditions.
Moreover, the study advocates for the adoption of these techniques in standard medical practice, suggesting that they could significantly reduce the rates of misdiagnosis and improve clinical outcomes. As medical technology continues to advance, the integration of such multimodal diagnostic tools holds the promise of transforming patient care , offering more precise, efficient, and cost-effective solutions for challenging medical diagnoses.
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Higher education is crucial for the development of states and societies and improving the overall quality of life. However, entry into higher education is often influenced by factors beyond qualifications, and individuals in the field face suppression from the controlling parties. These challenges undermine the value of education and the integrity of democratic processes like elections. In this paper, we study academic freedom in Lebanon and propose a technique that dynamically extracts the factors that might affect academic freedom. This technique comprises multiple stages: data collection, data preprocessing, static extraction of factors, dynamic extraction of factors, and evaluation. In the data collection stage, data was obtained from 254 participants through a questionnaire that discusses various facets of academic freedom. The preprocessing stage enhances data quality through cleaning, normalizing, and transforming. For static extraction, factors impacting academic freedom are identified using naive K-means clustering. In dynamic extraction, the Apriori algorithm identifies key metrics. Finally, a customized K-means algorithm clusters data based on a specific metric. This algorithm was applied on both, the statically and dynamically extracted metrics, and comparison was done based on the accuracy of the resultant clustering. This comparison demonstrates the effectiveness of the proposed technique in identifying and analyzing factors impacting academic freedom.
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The world is changing. Development, science, and technology are evolving at a fast pace, producing complex issues in different sectors and industries. This diversity challenges today’s generations to cope with and contribute to those issues, creating a scene of innovation in the heart of every industry. Higher education intervenes to prepare students to be up to those challenges with the spirit of determination and grit. It is one of the key drivers of growth performance, prosperity, and competitiveness in national and global economies [ 1 ]. The state of artificial intelligence in higher education has seen a rapid rise in publications, with new trends emerging in terms of research locations, researcher affiliations, and subject domains [ 2 ]. In this article [ 2 ], the authors conducted a systematic review of Artificial Intelligence in higher education from 2016 to 2022, using a priori, and grounded coding, the data from the 138 articles were extracted, analyzed, and coded. The vast importance of higher education lies in its impact on society, economy, education, students, and world development. It aids students to acquire skills related to critical thinking, innovation, stepping out of comfort zones, teamwork, oral communication, and problem-solving. Designed to broaden an individual’s knowledge and experience, higher education provides its holders with higher employability, creating a cloud of knowledge and civilization for society as a whole. By doing this, it provides countries with higher revenues, inducing governments to allocate a portion of their funds to this specific sector. Unfortunately, this vital sector faces a host of challenges that threaten its value. Applicants find themselves judged based on their political and religious background rather than the qualifications and capabilities they have gained in their lives. The better the connections the greater the possibility of acceptance is, regardless of value and educational level acquired. Empirical evidence shows that in Lebanon, academic freedom and admissions are influenced by sectarianism and political affiliations. Various studies, such as those by Altbach [ 3 ], discuss how political and religious factors impact higher education in Lebanon and other countries. Similarly, Agbo and Lenshie [ 4 ] explore how academic freedom in African countries is often compromised by political pressures. The stereotyping and discrimination observed in Lebanon can be generalized to other countries with similar socio-political dynamics. For instance, in Saudi Arabia, academic freedom is influenced by gender and age, as shown by Al-Saeed [ 5 ]. In Turkey, academic freedom is debated more philosophically than factually, indicating a need for more empirical studies, as highlighted by Ertem [ 6 ].
The socio-political system plays a crucial role in embedding academia. For example, in the United States, academic freedom is seen as a key indicator of liberal democracy but faces threats due to attacks on individual liberties, as discussed by Cole [ 7 ]. These examples underscore the importance of considering the socio-political context when examining academic freedom and the factors that influence it. Stereotyping can lead to discriminatory hiring practices where individuals are judged based on characteristics unrelated to their qualifications. This creates an environment where meritocracy is undermined, affecting both hiring and retention rates. In Pakistan, for example, gender inequality affects academic freedom and employment opportunities, with females facing more barriers than males [ 8 ]. In Africa, the lack of funding and political interference are significant barriers to academic freedom and employment stability [ 4 ]. These examples highlight the pervasive impact of socio-political factors on academic freedom and employment practices globally.
Adopting this mentality, academic institutions are impeded to achieve their lofty goal of building a knowledge-based society. Entities concerned such as professors, students, librarians, educational institutions, and society as a whole are subject to the rule of repression and restrictions that threaten the act of pursuing knowledge and research [ 9 ]. Reporting the right to educate and propose suggestions that appear awkward for authority or political parties, as absent also entails difficulties. In addition, in their decisions, proposals and opinions, the entities concerned may be deemed to be regulated, where it is forbidden to address any contentious material that could compromise the reputation of the political or religious parties supporting their presence in this sector. Deprived freedoms in this sector include the freedom in research and publications, the freedom to write and speak about any topic, and the classroom freedom of discussion. To sum up all these issues, it can be claimed that this sector is under the denial of academic freedom attack.
As Louis Menand once wrote, “Academic freedom is not just a nice job perk. It is the philosophical key to the whole enterprise of higher education” [ 10 ]. Regarded as a cornerstone of higher education, multiple aspects can influence academic freedom. In this paper, we propose a technique that dynamically extracts these metrics that play a role in the existence of academic freedom. Multiple stages can be outlined in the proposed method, where the preprocessing step was initiated after gathering real data from participants using a questionnaire. All missing values and irrelevant attributes were cleaned from the data and then converted into two versions, one consisting of pure nominal data and another of numeric data. After data collection and processing, the data are ready to enter the analysis stages. Further phases are aimed at extracting from a given dataset the metrics that shape academic freedom. Firstly, the extraction process is carried out statically by either adopting what is established in studies and research or implementing the clustering algorithm of K-Means and attempting to recognize common factors in a certain cluster of low or high academic freedom. Secondly, this operation, using the Apriori algorithm, is performed dynamically. The condition for considering an attribute as a metric of the given dataset is to have this attribute repeated in most of the strongly generated rules by the algorithm. Finally, a comparison is made to measure the performance of dynamic extraction. It is carried out using a developed new version of K-Means algorithm that clusters a given data according to a given attribute. This clustering is conducted for each of the selected metrics and a comparison of the sum of square errors (SSE) of the resulting clusters is performed. The lower the SSE, the better the metric selected would be. Final findings revealed that dynamic extraction was able to obtain better metrics evidenced by the lower SSE values garnered after clustering.
The remainder of this paper is organized as follows. Section 2 presents an overview of techniques proposed for studying the metrics that might affect academic freedom. In section 3 , we present a detailed illustration of the technique while exploring each of its stages. Section 4 exposes the simulation and the discussion of the obtained results. Finally, section 5 concludes the paper and gives directions for future work.
Academic freedom is not a modern concept; it has long been discussed and researched in a variety of countries. Many researchers debated its existence, others studied its impact and relation with higher education. [ 5 ] studied how academic freedom is being applied in a Saudi Arabia university. From data collected from different faculty members, the study showed that female members claim more academic freedom than their male peers, and younger members are more aware of their academic rights than older professors and academic staff. The study emphasized that the smooth operation of the university administration is often disrupted by this state of uncertainty of academic rights and freedom. In [ 11 ], a more narrow view of academic freedom as a professional privilege rather than a human right is previewed. Science, teaching, and speech independence were the categories included in this concept. It was also contended that intellectual freedom requires equality from authority, whether governmental, religious, or social. Academic freedom in Turkish literature was the core of what [ 6 ] studied. After reviewing sixty-one studies on research and scholarships in the Turkish literature, they found out that academic freedom was debated as a national, local, and structural term, but that most of these debates were philosophical rather than factually focused. More empirical studies of academic freedom are required, according to the paper, especially in the Turkish context. Moving to the United States, [ 7 ], argued that the presence of academic freedom is a key indicator of liberal democracy. Additionally, they stated that the creativity, discovery, research, and academic freedom of industrialized nations, including the United States are being exposed to jeopardy because of the attacks on the principles of individual liberty and freedom of expression. A study was conducted by [ 12 ], on the universities of Bologna mirroring the academic values in the European context, and the National University of Singapore is seen as a spot involved and engaged in the region’s university developments. To fulfill the study’s goal of gaining knowledge about academic freedom from various angles, interviews with a sample of participants who are diverse in their disciplines, career stages, and genders were done. After analyzing those interviews, the definition of academic freedom, its importance, its existence, associated obligations, and limitations were extracted to result out by stating that academic freedom varies from one country to another, and from one age to another as younger ages need to enjoy an equal amount of freedom as their supervisors to be fully integrated in the academic world. Also, funding was one of the main factors spotted out by the results, as it plays a role in the choice of research conducted whether theoretical or practical, because as stated practical research is favored as it consumes less time. While [ 13 ] tried to shape academic freedom and frame it in an academic scope, integrating the limits that might be imposed by the Federal Constitution of 1988. Along with this frame, [ 13 ], concluded that academic freedom is an umbrella for various freedoms including the freedom of teachers to teach, students to learn, researchers to research, and knowledge to be shared. As for the Federal Constitution of 1988, it enshrines the teacher’s right to expose only reasonable ideas and positions, i.e. considering the right to education as a mechanism for preserving ideological pluralism, rather than a standalone freedom. [ 14 ] went further to elaborate on academic freedom being a stiff wall protecting universities and their members from any governmental or other universities’ intrusion. In that scope, the author expressed the danger of exceptional cases where academic freedom is used by professors in a classroom to harass, bully, or verbally assault students the idea of putting limits to academic freedom. But, at last, he emphasized by the assistance of the First Amendment that protects the speech of all thoughts, including those that are controversial, uncivil, repulsive, or worrisome, that intrusions on academic freedom must be battled from the beginning, and if those challenging cases were encouraged, they will gain momentum in suppressing free expression, and it will become more difficult to defend the respected speech. The research by [ 15 ] identified sixteen significant challenges facing universities in the United Kingdom, each posing a threat to their core mission. Among these, the issue of instrumentalism stands out. This mentality shifts the university’s focus from the pursuit of knowledge for its own sake to objectives such as social mobility, career development, sustainable futures, or economic rejuvenation. This shift frames academic freedom in materialistic terms, undermining its noble intent. Additionally, marketisation poses a threat to academic freedom by transforming students into customers and education into a commercial product. Financial crises also emerged as a challenge, highlighted ironically by the observation that while universities claim to be financially strained, they still invest heavily in non-academic roles.
In a related vein, [ 16 ] introduced the influence of social media on academic freedom. The features of social media, combined with academic institutions’ concern for their reputation, have created an environment where expressions made outside university walls are more vulnerable and perilous than before. Universities now monitor and respond to faculty members’ social media posts, sometimes criticizing, repudiating, or even punishing them for their comments. To foster a more supportive environment for such expressions, [ 16 ] recommended updating the guidelines of the American Association of University Professors (AAUP). This update would aim to protect social media posts and positions, addressing the current exploitation of the AAUP’s silence on this issue by institutions to impose limits on individuals, which conflicts with the protections stated in First Amendment case law. Where [ 17 ] defines academic freedom in a simpler and broader approach saying that it is the freedom to do academic work. Using this conception, six freedoms were inserted under this definition, where academic freedom was defined as the freedom to teach, learn, and question, and considered as a type of intellectual freedom unique to academic positions and perspective, critical at all levels of education and in any other educational settings, collaborative, and institutional, and intrinsic to the academic credibility of any academic journey or organization. All this is to state that, the entirety of academic freedom can not be accomplished without understanding its relevance to all academics and its position in all academic contexts. Cormac McGrath et al. [ 18 ] examine the attitudes of university teachers toward the adoption of artificial intelligence (AI) in higher education, employing an experimental philosophy approach. Through an online survey involving three distinct scenarios, focusing on first-generation students, a typical student, and students with learning disabilities, and 18 consistent questions, the study gathered responses from 194 out of 1773 teachers. The findings highlight varying perceptions of responsibility and equity in AI implementation, with a notable willingness to use AI tools to support equitable outcomes, particularly for first-generation and disabled students. Additionally, the results show significant differences in responses based on demographic factors such as gender, age, and academic position in certain cases. The study also uncovers prevalent concerns among teachers regarding fairness, responsibility, and their understanding and resources for integrating AI into teaching practices.
Specialized to countries, [ 4 ] explores the relationship between the state and academics to determine the dialectics of African academic freedom struggles. In Africa, the challenges of intellectual freedom through academic institutions are tied to the lack of funding and oppressive state authority, where the political class when gained power after independence, was hesitant to permit academic freedom to intellectuals on whom they depended heavily for fear of losing power. So academic freedom was only allowed to the degree that it does not coup the citizens against the state. [ 4 ] also stated that the reluctance of African academics to criticize Africa’s political elites is to blame for the system’s deterioration, where they have also been charged with being quiet while encouraging African leaders to plunder wealth for personal benefit by using religion, territory, race, and other primal identities to mislead the population. Moving to Pakistan, [ 8 ], found that higher education is not equal for both genders, where females’ academic freedom is less than that of males, where societal values clash with corporate politics, placing female workers at a disadvantage. In that scope, the author suggested that the Higher Education Community (HEC) should introduce educational programs to teach male workers about the importance of women’s jobs and responsibilities in society which necessitates a shift in mindsets to be more accepting of female employees and the ’cleansing of the male mentality’. Finally, [ 19 ] conducted a comparative study using systematic data analysis to define academic freedom in India and the United States and explore where academic freedom is more safeguarded. As a result, the author found that both have similar definitions of academic freedom, yet different protection mechanisms. India was found to have breaches in the Indian Penal Code, used to outlaw freedom of expression when it is incompatible with the country’s dignity and reputation, the government has the power to curb it and the insanity activities designed to insult religious sentiments and expression that encourages religious hatred within Higher Educational Institutions (HEI). Thus the study proposes that some particular provisions of the Indian Penal Code be revised to secure academic freedom in India.
As a definition, academic freedom might seem plain, but it is deep. It lies at the core of every educational institution’s mission. The existence of academic freedom can be closely linked to the development of the higher education system. It can be stated as the freedom of the professor to teach and the freedom of the student to learn [ 3 ]. This simple definition holds the profound meaning of having no external control over the professor and no limitations on the curiosity of students to ask. However, academic freedom is struggling to exist in an environment that comprises several factors influencing it. In this section, we introduce a technique that provides the ability to extract dynamically the metrics that affect academic freedom. This operation of extracting metrics can be done statically, but using the proposed technique, better factors are extracted. This is evident by the accuracy of resulting clusters of clustering data based on these factors. The proposed technique relies mainly on the Apriori algorithm and a customized version of the K-Means clustering algorithm. Figure 1 illustrates the five stages of the technique, with the algorithm and procedure done in each of them. In what follows, is an exploration of each stage.
Architecture of the approach
Participants were selected based on their expertise in the higher education sector. They included employees and academic staff from both government and private sector institutions in Lebanon. The participants were aware of the content of the questionnaire and voluntarily accepted participation. To ensure the reliability of the questionnaire, it was pre-tested with a smaller group of similar participants to check for consistency in responses. Content validity was established by having the questionnaire reviewed by experts in higher education and academic freedom. Construct validity was ensured through factor analysis to confirm that the questions effectively measured the intended constructs.
The primary stage of the proposed technique is gathering data about academic freedom and its level of dependence in Lebanon. To collect data, a questionnaire was formulated comprising 69 questions tackling different aspects of interest. Two versions of the questionnaire were prepared, one in English and the other in Arabic. A web-based application was created to conduct this questionnaire. The link to this application was distributed to employees and academic staff in official and private departments in Lebanon, and responses were accepted in the period between 11 May, 2023, and 24 June. In total from both the Arabic and English version, 254 participants registered a record. The questions of the survey were perfectly studied to cover a variety of titles. Each title can be regarded as a section in the questionnaire, containing a set of questions. Those sections can be listed as such:
Demographic questions : As the title states, questions about age, gender, country of residence, workplace, university, and position are asked in this section. Seven questions are involved under this title.
Academic Freedom in General : This type of question aims to collect information about the current state of academic freedom in educational institutions and how participants look to academic freedom. For this purpose, seven questions are asked under this title.
Essentials of Academic Freedom : Four questions aiming to understand if the essentials of academic freedom do exist were specialized to this part of the questionnaire. Questions included asking about freedom in teaching and discussion in classes, freedom in suggesting ideas, especially controversial ones, and whether there exists any political or religious prejudice when considering job decisions.
Flow of Knowledge : Questions in this part enquire about freedom of thought, decisions, and whether there are protecting laws for academic freedom. Four questions were dedicated to fulfilling the aim.
Environmental Issues : As the title implies, the four questions in this part are all related to the link between academic freedom and society in general.
External Forces : In this survey, our mere goal is to examine the factors that might influence academic freedom. Eight questions in this section were dedicated to collect the needed information about factors like politics, religion, positions, and others.
Educational Objectives and Policies : Funding preferences for academic freedom, research, access to libraries, and the extent of acquiring academic freedom are all interrogated in a set of seven questions under this title.
Institutional Accountability : Three questions to shape the responsibility of the academic institutions were put in this section.
Rights and Freedoms of Higher-Education Teaching Personnel : The two questions in this section are bounded to ask if the entrance to the higher education sector is judged solely by qualifications or other factors that contribute.
Terms and Conditions of Employment : This is one profound part of the survey that enquires about the bond between employment in particular in academic institutions and academic freedom. 12 questions related to the job positions, salaries, perks, employing criteria, promotions, and other job-related aspects, were inserted under this title in the questionnaire.
Free Teaching Profession : The majority of the ten questions in this section are to be answered by a number from 1 to 10. The scope of this section is testing the extent of the influence of factors that affect academic freedom. For instance, political, economic, and religious challenges are questioned.
Out of the 69 questions, only 65 of them were promoted to the second stage of the technique. The four eliminated attributes were the ones that hold multiple answers resulting from multiple-choice questions. This measure was considered to mitigate the complexity in the following levels of analysis.
The trivial tunnel that data shall pass through after being collected is processing. Applied to the used dataset are cleaning, integrating, and transformation.
Cleaning: Upon collection of data, participants may leave intentionally or unintentionally an empty field. Those missing values are in particular treated in the cleaning stage, in addition to the removal of irrelevant data. The type of all data fields is either a number or a word, whenever a number is missing it is replaced by 0, while if a word is missing it is replaced by “none”. This criterion was considered because the percentage of missing values was small. As for the removal of irrelevant data, the date of filling the survey that was added to the records was removed because it lies out of the scope of our interest.
Integration: As mentioned earlier, two copies of the survey were prepared and the records collected from each can be seen in Table 1 . To integrate the records from both surveys, the Arabic records were translated to English to end up with a single final English version of 254 records. This version is to be used in further stages.
Transformation: In this phase of processing, the data were rendered to create two versions: one consisting purely of nominal values and another consisting purely of numeric values. This step was of profound importance because the used machine learning algorithms require a specific type of data. In particular, the Apriori algorithm only accepts nominal attributes. The K-Means clustering algorithm can accept both, yet it depends on the criteria for calculating the difference between any two records. In our case, the difference is computed via the Euclidean distance which calls for numeric values to be given as parameters. To perform this operation, first, we studied the nature of the used attributes as presented in Table 2 .
To create a pure nominal version, the nine numeric values had to be treated. Those values are answers to questions that ask “To what extent...”, and so they range from 1 to 10. The treatment of those attributes is illustrated in Table 3 .
To create a pure numeric version, all 60 nominal attributes had to be treated. The yes-no questions were simply replaced by 1(yes) and 2(no). Similarly, other types of questions were replaced, for example, if a question has five distinct answers, then they are replaced by numbers from 1 to 5 respectively.
Organizational innovative strategies in the hyperdynamic environment are locked in the historical path of decision-making. The reason why organizations lose their flexibility and fluidness and become sticky and rigid relies on the drawn paths they form intentionally or unintentionally over time. Awkward practices, built-in rational maps, and group culture and thinking constitute the major conditions that lead organizations and universities to become path dependent according to the literature. Their strategies become irreversible and past events map future actions; contrary of strategic management. Decisions become historically inured. The educational institutions if path dependent, will be rigid with conditioned innovation and pre-drawn nonergodic outcomes [ 20 ]. According to [ 21 ], path dependence refers to complex nonergodic processes that are ‘unable to shake free of their history’ [ 22 , 23 ].
[ 20 ] determined “three developmental phases of path dependence (Fig. 2 ), starting with (1) singular historical events, (2) which may, under certain conditions, transform themselves into self-reinforcing dynamics, and (3) possibly end up in an organizational lock-in”. each phase develops under different administrations, but the path continues to be shaped. Different studies identify self-reinforcing practices as dynamics that tend to build up a specific path of decision with a state of total inflexibility. The first phase is the preformation phase where the adoption of a choice is unpredictable. The picked decision, or critical juncture, becomes the push towards a self-reinforcing process. The second phase comes when a new regime reinforces the afore dynamics and makes the system more irreversible. Hence, the extent of choices diminishes and the decision processes remain contingent but nonergodic. Constrictions increase to reach the third phase, the lock-in phase with a patterned decision. The organizations end up with a repeated predominant approach with an inefficient system. However, the social character of organizations gives them a narrow range of unpredictable decisions that effectively will not alter the routine action pattern.
As a result, to test whether academic freedom is path dependent, a longitudinal study would be appropriate or more conveniently, a cross-sectional study of academics comparing three age groups that will represent the trend of thought of an ensemble of academics over a long time as per ergodic studies [ 23 ].
Thus to extract the factors that might impact academic freedom, in this phase we counted on what research and studies have accomplished. Another approach could have been considered, which is applying the simple K-Means clustering, and trying to observe common factors among clusters. Yet in our case, this was not efficient because the data were not strongly correlated. Being so, we counted on research and studies to get static metrics. As a result, we considered age and description as two metrics that affect academic freedom. The age in our dataset can have three values “Less than 35 years”, “Between 35 and 50”, and “More than 50”. Whereas the description attribute specifies the position of the filling participant. This attribute can hold the following values: “A researcher”, “A full-time professor”, “A part-time professor”, “An hourly-paid lecturer”, “An academic-related staff”.
Developmental phases of path dependence [ 20 ]
This phase of the chain is the core of this technique. In an attempt to dynamically extract the factors that influence academic freedom, the Apriori algorithm was used. The Apriori algorithm is a very simple algorithm for identifying frequent itemsets from large transactions in the database. The name of the Apriori algorithm is derived from the fact that this algorithm uses previous knowledge of frequent itemsets for the next iteration process [ 24 ]. The resulting itemsets undergo rules analysis to generate rules having support, confidence, and lift values meeting the conditions. The equations to calculate those criteria are provided below respectively:
Support value: The support value of an association rule is a measure of how frequently the itemset appears in the dataset. Specifically, it is the proportion of transactions in the dataset where both X and Y occur together, where T is the total number of transactions.
Confidence value: Is a measure of the reliability of an association rule. The confidence value measures the number of transactions containing both X and Y and the number of transactions containing X.
Lift value: Is a measure of the strength of an association rule compared to the expected frequency of Y if X and Y were independent. It shows the validity of the transaction process, where the confidence of a transaction \(conf(X \rightarrow Y)\) is normalized by the support \(sup(X \rightarrow Y)\) .
The application of this algorithm in the scope of this technique is examined in Algorithm 1. First, the dataset is transformed into a set of “records” to be ready to enter the algorithm. Each data record in the dataset is transformed into an Apriori record. Those records take the form of transactions having items, as it is well known when using Apriori. So for instance, as seen in Fig. 3 , “A=Yes” and “B=No” are two itemsets.
Apriori Algorithm
Record Formulation
Considering A, B, C, D, and E as attributes, the data record illustrated becomes as seen in the figure. After applying the same criteria to all data records, the Apriori records are sent to the algorithm, in addition to specified confidence and support. As for the lift value, only rules with lift > 1 are accepted.
After the Apriori algorithm is applied, and rules complying with the conditions of specified support(sup), confidence(conf), and lift are generated, those rules are treated to extract the attributes found in each rule. For instance,
Example of rules:R1: {A=Yes} \(\rightarrow\) {B=Yes, C=Yes, D=Yes} (conf: 0.958, supp: 0.906, lift: 1.006) R2: {A=No} \(\rightarrow\) {E=Yes} (conf: 0.968, supp: 0.926, lift: 1.306)
Attributes extracted from the rules are:R1:{A, B, C, D}R2:{A, E}
To extract the metrics, the algorithm is repeated on a set of values for confidence and support. For each support sup and confidence conf , we count the repetition of each extracted attribute from the generated rules, the most repeated item is regarded as a metric. For different values of confidence and support, multiple metrics can be extracted. In this example, attribute A is mostly repeated, then “A” is considered a metric.
This is the final stage of the technique, where the comparison between the accuracy of the factors extracted statically and dynamically is examined. To do this comparison, the usage of the K-Means clustering algorithm was required. Yet, the used algorithm is not the naive simple one, but a customized version developed for the purpose. In this study, K-Means Clustering was employed to categorize the survey data into distinct clusters based on 69 attributes related to academic freedom. The attributes were selected through a comprehensive review of existing literature, expert consultations, and preliminary data analysis to ensure their relevance to academic freedom. The clustering process involved initializing centroids and iteratively assigning data points to the nearest centroids based on Euclidean distance, refining the clusters until convergence was achieved. This method allowed us to identify patterns and group respondents with similar perceptions and experiences of academic freedom, providing a nuanced understanding of the factors influencing academic freedom in different contexts. The K-Means is generally an iterative algorithm in which the process begins by choosing an initial centroid randomly for each cluster and the number of clusters to be created. Then, using the Euclidean distance, each data point is allocated to the nearest centroid, and the first cluster creation round is done. The cluster centroids are then modified and the procedure is replicated before convergence is achieved (Algorithm 2). As for the customized K-Means algorithm used in this technique, the process begins by specifying additionally a metric to cluster upon (Algorithm 2). The difference in application is that, when calculating the distance between two data points, this metric, which is originally an attribute found in the dataset, is removed from the calculation process.
Customized K-Means Clustering Algorithm
After applying the K-Means clustering algorithm, the accuracy of the resultant clusters must be tested. For this purpose, the sum of square errors (SSE) is used. The SSE value is computed using the equation below. To interpret this value, it is stated that the lower the value is, the higher the accuracy and the better the results are.
where \(C_j\) is the \(j^{th}\) cluster; \(m_j\) presents the centroid of \(C_j\) ; \(distance(x,m_j)\) is the distance between a data point x and the centroid \(m_j\) .
In this section, we will emphasize the importance and accuracy of the proposed technique to extract dynamically better metrics that mostly influence academic freedom. The implementation was accomplished using the Python language.
Before presenting the detailed results, we define the key attributes used in our analysis:
Gender: The gender identity of the respondent.
Age: Categorized into three groups:–Less than 35 years–Between 35 and 50 years–More than 50 years
Professional Description: The professional role of the respondent (e.g., researcher, professor).
HighestDeg: The highest degree obtained by the respondent.
UnivYears: The number of years the respondent has worked in a university setting.
SECHigherEdu?: Whether the respondent believes higher education plays a role in social equity and change.
ReshapeEdutoSEChanges?: The respondent’s view on whether education should be reshaped to promote social equity.
TPParticipate?: Whether the respondent participates in political or social activities.
AcedCommVulnerableToPoliticalPressures?: Perception of the academic community’s vulnerability to political pressures.
RightToEduEnjoyedInAnAtmosphereOfAcademicFreedom?: Whether the respondent enjoys their right to education in an atmosphere of academic freedom.
TypesOfDiscriminationInEdu?: Types of discrimination faced in the educational setting.
RightToPutNewIdeasWithoutLosingYourJob?: The right to express new ideas without the fear of job loss.
FreedomInTeachingAndDiscussionInClass?: Freedom to teach and discuss topics in class.
FiredIf_OfDifferentPoliticalParty_RefuseToRevealUrPoliticalBeliefs?: The risk of being fired for political beliefs or affiliations.
HinderedUFromUrRightToPursueTruthInUrOwnWay?: If respondents feel hindered in their pursuit of academic truth.
LoseJobForPublishingIdeasUnfavorableTo?: Risk of losing a job for publishing controversial ideas.
AcFreImportantForSociety?: This attribute measures the perceived importance of academic freedom for societal development.
VulnerableToPoliticalPressure: Indicates the perceived susceptibility of academic freedom to political influence.
The attributes used in this analysis encompass a broad range of factors affecting academic freedom. These include:
Demographic Factors: Such as age, gender, and country of origin, which can influence personal experiences and perceptions of academic freedom.
Institutional Characteristics: Such as the level of institutional independence from state control and the existence of policies supporting academic freedom.
Personal Experiences: Such as the ability to publish freely, engage in political debates, and participate in international academic collaborations.
Each attribute was selected for its potential impact on academic freedom, allowing us to create a comprehensive profile of the academic environment as experienced by respondents. This detailed analysis enables us to pinpoint specific areas where academic freedom is either upheld or compromised.
As stated before, the Apriori algorithm was used in the mission of extracting metrics dynamically. The algorithm was tested for 16 different combinations of confidence and support values, attaining a lift value greater than one to ensure a positive correlation between the different sides of the rule. The number of rules generated in each of those 16 permutations of confidence and support values are presented in the graph of Fig. 4 .
Number of generated rules for different support and confidence values
After generating the rules, and the rules are treated by extracting the comprising attributes from each, the frequency of the detected attributes is calculated. The result of this step is a graph generated from code for each value of confidence and support, showing the detected attributes and the frequency of each in the generated rules.
Rules and attributes detected for (conf ≥ 0.6, sup ≥ 0.7)
Rules and attributes detected for (conf ≥ 0.7, sup ≥ 0.9)
Rules and attributes detected for (conf ≥ 0.8, sup ≥ 0.8)
Rules and attributes detected for (conf ≥ 0.9, sup ≥ 0.6)
Figures 5 , 6 , 7 , and 8 show the most frequent attribute in the rules generated for different values of confidence and support. The results for the 16 graphs of the 16 different combinations of confidence and support values, with the most frequent attribute are presented in Table 4 .
Extracting the dynamic metrics and concerning Table 4 , we would end up with three attributes: “AcFreImportantForSociety?”, “ReshapeEduToSE”, and “VulnerableToPoliticalPressure”.
After performing the above steps, it is time to validate and prove the added value of this technique to the world of academic freedom and data analysis. To do this, we applied the customized K-Means clustering algorithm (Algorithm 2) according to the aforementioned static (Age and Description) and dynamic (AcFreImportantForSociety?, ReshapeEduToSE, and VulnerableToPoliticalPressure) chosen metrics. Then we calculated the sum of square errors of the resulting clusters in each of the cases. The final results of the metrics with the SSE, using four as the number of clusters created in each case, are presented in Table 5 .
In an examination of the SSE values illustrated in Table 5 , we can see that the SSE value of the clusters resulting from any dynamic metric is lower than all SSE values of clusters resulting from the static metrics. The lower the SSE, the more accurate the cluster results. Starting from this interpretation we can conclude that the proposed technique was able to provide dynamically, better metrics affecting academic freedom than statically.
In conclusion, this research delved into the elements impacting freedom, in Lebanon using K-Means clustering to pinpoint characteristics and their connections. The analysis uncovered that factors like religious ties, age and institutional policies play a role in determining academic freedom. The study shed light on the difficulties academics in Lebanon face due to pressures and discrimination linked to political and religious views.
The results emphasize the need to address cultural biases within settings. Policymakers and educational leaders must acknowledge these biases in order to foster an open academic atmosphere. The study methodology provides a framework for examining freedom in similar circumstances offering valuable insights for regions with comparable sociopolitical landscapes. Promoting freedom requires implementing policies that reduce influences and promote inclusivity ensuring that educational institutions serve as impartial hubs of knowledge and research.
Subsequent research should build upon this study by exploring factors influencing freedom, such as economic pressures and gender dynamics. Longitudinal studies could offer an understanding of how these elements change over time. Moreover applying the framework to regions, with varying sociopolitical backgrounds can help validate the findings and broaden the applicability of the results. Working with scholars from, around the world can offer viewpoints. Enrich the overall comprehension of academic freedom, on a global scale.
The data that support the findings of this study are available from the authors upon request due to restrictions eg privacy or ethics.
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This research received no external funding.
Hassan Harb, Chamseddine Zaki, Alaaeddine Ramadan, Louai Saker, Nour Mostafa and Layla Tannoury have contributed equally to this work.
Faculty of Sciences, Lebanese University, Beirut, Lebanon
Noura Joudieh
College of Engineering and Technology, American University of the Middle East, Egaila 54200, Kuwait
Hassan Harb, Chamseddine Zaki, Louai Saker & Nour Mostafa
College of Engineering and Computing, American University of Bahrain, Riffa, Bahrain
Alaaeddine Ramadan
Faculty of Business Administration and Economics, Lebanese University, Beirut, Lebanon
Layla Tannoury
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All authors contributed to the study conception, literature review, and design. N.J., H.H., and C.Z. performed material preparation, data collection, and analysis. Validation was done by A.R., N.M., L.S., and L.T. The first draft of the manuscript was written by N.J. H.H., A.R., and C.Z. reviewed and edited the manuscript. All authors commented on previous versions of the manuscript. All authors participated in follow-up meetings related to the research. All authors read and approved the final manuscript.
Correspondence to Chamseddine Zaki .
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The study was performed in accordance with the ethical standards as laid down in the 1964 Declaration of Helsinki and its later amendments or comparable ethical standards. Ethical approval for this study was obtained from the Scientific Committee of the Faculty of Economics and Business Administration, Lebanese University. Informed consent was obtained from all individual participants included in the study.
Informed consent was obtained from all subjects involved in the study.
The authors declare no conflict of interest.
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Joudieh, N., Harb, H., Zaki, C. et al. Higher education in the era of artificial intelligence: academic freedom as a case study. Discov Sustain 5 , 220 (2024). https://doi.org/10.1007/s43621-024-00425-w
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3.1.1 Format of a case study. Except to identify the case and the specific type of a case study that shall be implemented, the researchers have to consider if it's wisely to make a single case study, or if it's better to do a multiple case study, for the understanding of the phenomenon.
This study attempts to answer when to write a single case study and when to write a multiple case study. It will further answer the benefits and disadvantages with the different types. The literature review, which is based on secondary sources, is about case studies. Then the literature review is discussed and analysed to reach a conclusion ...
A single-case study is an in-depth analysis of a single case. This type of case study is useful when the researcher wants to understand a specific phenomenon in detail. For Example, A researcher might conduct a single-case study on a particular individual to understand their experiences with a particular health condition or a specific ...
A case study is a detailed study of a specific subject, such as a person, group, place, event, organization, or phenomenon. Case studies are commonly used in social, educational, clinical, and business research. ... You might use just one complex case study where you explore a single subject in depth, or conduct multiple case studies to compare ...
The difference between the single- and multiple-case study is the research design; however, they are within the same methodological framework (Yin, 2017). Multiple cases are selected so that "individual case studies either (a) predict similar results (a literal replication) or (b) predict contrasting results but for anticipatable reasons (a ...
A multiple case studies approach was adopted that spanned over 2 years, as it is difficult to investigate all the aspects of a phenomenon in a single case study (Cruzes, Dybå, Runeson, & Höst, 2015). The purpose here is to suggest, help, and guide future research students based on what authors have learned while conducting an in-depth case ...
The major advantage of multiple case research lies in cross-case analysis. A multiple case research design shifts the focus from understanding a single case to the differences and similarities between cases. Thus, it is not just conducting more (second, third, etc.) case studies. Rather, it is the next step in developing a theory about factors ...
What is a case study? Whereas quantitative methods look at phenomena at scale, case study research looks at a concept or phenomenon in considerable detail. While analyzing a single case can help understand one perspective regarding the object of research inquiry, analyzing multiple cases can help obtain a more holistic sense of the topic or issue.
A multiple-case research design shifts the focus from understanding a single case to the differences and similarities between cases. Thus, it is more than just conducting another (second, third, etc.) case study. Instead, it is the next step in developing a theory about factors driving differences and similarities.
A case study is a detailed study of a specific subject in its real-world context, focusing on a person, group, event, or organisation. ... You might use just one complex case study where you explore a single subject in depth, or conduct multiple case studies to compare and illuminate different aspects of your research problem. Case study examples;
A multiple case research design shifts the focus from understanding a single case to the differences and similarities between cases. Thus, it is not just conducting another (sec-ond, third, etc.) case study. Rather, it is the next step in developing a theory about fac-tors driving differences and similarities.
there is no common understanding of how to integrate separate single-case studies into a joint multiple-case design, it is most important to note that the synthesis process between the single cases does not follow a statistical sampling rationale. As Yin (1994) notes, "Every case should serve a specific purpose within the overall scope of ...
Case study research involves an in-depth, detailed examination of a single case, such as a person, group, event, organization, or location, to explore causation in order to find underlying principles and gain insight for further research. ... Multiple-case studies: Used to explore differences between cases and replicate findings across cases ...
A case study is a methodological research approach used to generate an in-depth understanding of a contemporary issue or phenomenon in a bounded system. A case study is one of the most widely used and accepted means of qualitative research methods in the social sciences (Bloomberg & Volpe, 2022). The case study approach is particularly useful ...
A case study is one of the most commonly used methodologies of social research. This article attempts to look into the various dimensions of a case study research strategy, the different epistemological strands which determine the particular case study type and approach adopted in the field, discusses the factors which can enhance the effectiveness of a case study research, and the debate ...
Single case study analyses offer empirically-rich, context-specific, holistic accounts and contribute to both theory-building and, to a lesser extent, theory-testing. ... and an 'embedded' case design with multiple units of analysis (Yin, 2009: 50-52). The former, for example, would examine only the overall nature of an international ...
case study research. Yin carefully distinguishes between single and multiple case stu dies. Comparing a single case study with an experiment, Yin maintains that single case studies are relevant for critical cases in order test theory, or to analyze cases that may be extreme, typical, revelatory or longitudinal. Multiple case design has it ...
There are several different definitions and kinds of case studies. Because of different reasons the case studies can be either single or multiple. This study attempts to answer when to write a single case study and when to write a multiple case study. It will further answer the benefits and disadvantages with the different types. The literature review, which is based on secondary sources, is ...
A case study relies on multiple sources of evidence, with data needing to converge in a triangulating fashion." 1(p15) This design is described as a stand-alone research approach equivalent to grounded theory and can entail single and multiple cases. 1,2 However, case study research should not be confused with single clinical case reports.
Jack (2008) and Stake (1995) another difference between a single case study. and a multiple case study is that in a multiple case study the researcher. studies multiple cases to understand the similarities and differences between. the cases. Therefore the researcher can provide the literature with important.
This is frequently associated with several experiments. A difference between a single case study and a multiple case study is that in the last mentioned, the researcher are studying multiple cases to understand the differences and the similarities between the cases (Baxter & Jack, 2008; Stake, 1995). Another difference is that the researcher is ...
This multiple case study investigates the coopetitive tactics adopted by digital platform companies when navigating different coopetition situations through the lens of data and AI resources. Eight propositions are developed linking the allocation and application tendencies of data resources to the coopetitive tactics employed by platforms ...
Background There is an ongoing controversy regarding whether single-occupancy rooms are superior to multiple-occupancy rooms in terms of infection prevention. We investigated whether treatment in a multiple-occupancy room is associated with an increased incidence of nosocomial coronavirus disease 2019 (COVID-19) compared with treatment in a single-occupancy room. Methods In this retrospective ...
2017-01-12 J. Gustafsson Single case studies vs. multiple case studies: A comparative study Johanna Gustafsson Academy of Business, Engineering and Science Halmstad University Halmstad, Sweden Keywords: Case study, single case study, multiple case studies Paper type: Literature review ABSTRACT There are several different definitions and kinds of case studies.
Abstract. This chapter addresses the peculiarities, characteristics, and major fallacies of single case research designs. A single case study research design is a collective term for an in-depth analysis of a small non-random sample. The focus on this design is on in-depth.
Some studies selected specific sets of GCMs, like a study utilizing five CMIP5 models to predict the response of the endemic seed plants to future climate change in the Tibetan Plateau [22,23]. Others relied on only a single GCM reported to simulate the Tibetan Plateau's climate well [24,25]. Despite these diverse approaches, none of these ...
The use of gastrointestinal disease multiplex polymerase chain reaction (GI PCR) testing has become common for suspected gastrointestinal infection. Patients often test positive for multiple pathogens simultaneously through GI PCR, although the clinical significance of this is uncertain. This retrospective cohort study investigated risk factors and clinical outcomes associated with detection ...
The case study is the process, whether a method or a methodology, by which the issue is illuminated. This remains true in selecting a collective or multiple case study. Although a single issue or concern is once again selected with the collective case study, the researcher chooses multiple case studies to illustrate the issue.
A recent case report published in Cyborg Bionic Systems details the diagnosis of idiopathic normal pressure hydrocephalus (iNPH) using multimodality diagnostic approaches, highlighting significant ...
Higher education is crucial for the development of states and societies and improving the overall quality of life. However, entry into higher education is often influenced by factors beyond qualifications, and individuals in the field face suppression from the controlling parties. These challenges undermine the value of education and the integrity of democratic processes like elections. In ...